Welcome to my GitHub profile! I am a Clinical Senior Research Fellow at the University of Glasgow and an Honorary Consultant Gastroenterologist. My work focuses on applying machine learning and generative AI technologies in Inflammatory Bowel Disease (IBD).
- Machine learning to dissect the heterogeneity of IBD-associated fatigue
- ChatIBD - AI companion for IBD clinicians
- Current Role: Clinical Senior Research Fellow, University of Glasgow (2024–Present)
- Specialization: Gastroenterology, with a focus on Inflammatory Bowel Disease (IBD)
- Blog: shaunchuah.github.io
- Research Group: Gut Translational Research Group
- Developing scalable data platforms for translational research
- Applying machine learning to decode IBD immunology
- Translating advances in generative AI for IBD
- Circulating Cell-Free DNA in Inflammatory Bowel Disease (Faculty Reviews, 2023)
- Neutrophil-dependent Mitochondrial DNA Release in IBD (Gastro Hep Advances, 2023)
- Real-world Effectiveness of Vedolizumab in IBD (Journal of Crohn's and Colitis, 2019)
For a full list, visit my ORCID profile.
- How to Build Your Sample Tracking System - ESPGHAN, 2022
- ESEGH – A Personal View - UEG Week Virtual, 2020
- Languages: Python, R
- Machine Learning: TensorFlow, PyTorch, SciKit-Learn
- Bioinformatics: seurat, bowtie2, kraken2/bracken, metaphlan
- AI: vercel/ai-sdk, OpenAI SDK
- Frontend: HTML, CSS, JavaScript
- Backend: Django, Next.js, FastAPI
- Databases: PostgreSQL, SQLite, Redis
- Platforms: Azure, AWS, Vercel
- Containerization: Docker
- Data Engineering: Dagster, NextFlow, Azure Batch
- CI/CD: GitHub Actions
- Tools: Git, GitHub
Explore our research group code at github.com/1-gut for projects on gut biology, machine learning, and IBD research.
- Email: [email protected]
- LinkedIn: linkedin.com/in/shaunchuah
- X: x.com/drshaunchuah
Thanks for visiting! Feel free to explore my repositories and reach out for collaboration.