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feat: support fastq or fastq.gz input format for RNA samples#76

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JTL-lab merged 1 commit into
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feat/support_fastq_input
Mar 26, 2026
Merged

feat: support fastq or fastq.gz input format for RNA samples#76
JTL-lab merged 1 commit into
mainfrom
feat/support_fastq_input

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@JTL-lab JTL-lab commented Mar 26, 2026

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PR checklist

  • This comment contains a description of changes (with reason).
  • If you've fixed a bug or added code that should be tested, add tests!
  • If you've added a new tool - have you followed the pipeline conventions in the contribution docs
  • Make sure your code lints (nf-core pipelines lint).
  • Ensure the test suite passes (nextflow run . -profile test,docker --outdir <OUTDIR>).
  • Check for unexpected warnings in debug mode (nextflow run . -profile debug,test,docker --outdir <OUTDIR>).
  • Usage Documentation in docs/usage.md is updated.
  • Output Documentation in docs/output.md is updated.
  • CHANGELOG.md is updated.
  • README.md is updated (including new tool citations and authors/contributors).

@JTL-lab JTL-lab merged commit e1069c9 into main Mar 26, 2026
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@JTL-lab JTL-lab deleted the feat/support_fastq_input branch May 16, 2026 14:23
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