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Fix/proteomics corrections#81

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JTL-lab merged 2 commits into
mainfrom
fix/proteomics_corrections
Apr 3, 2026
Merged

Fix/proteomics corrections#81
JTL-lab merged 2 commits into
mainfrom
fix/proteomics_corrections

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@JTL-lab JTL-lab commented Apr 3, 2026

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PR checklist

  • This comment contains a description of changes (with reason).
  • If you've fixed a bug or added code that should be tested, add tests!
  • If you've added a new tool - have you followed the pipeline conventions in the contribution docs
  • Make sure your code lints (nf-core pipelines lint).
  • Ensure the test suite passes (nextflow run . -profile test,docker --outdir <OUTDIR>).
  • Check for unexpected warnings in debug mode (nextflow run . -profile debug,test,docker --outdir <OUTDIR>).
  • Usage Documentation in docs/usage.md is updated.
  • Output Documentation in docs/output.md is updated.
  • CHANGELOG.md is updated.
  • README.md is updated (including new tool citations and authors/contributors).

JTL-lab added 2 commits April 1, 2026 10:38
…tracking, increase exitReadTimeOut for FragPipe timeout bug, add fix for FUSE mounting issues with Singularity
@JTL-lab JTL-lab merged commit ddcaa8d into main Apr 3, 2026
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