feature(hyperon_das_query_engine): evolution use binded DASNode

Makefile

@@ -50,7 +50,7 @@ run-inference-agent-client:
 	@bash -x src/scripts/run.sh inference_agent_client $(OPTIONS)
 
 run-evolution:
-	src/bin/evolution $(OPTIONS)
+	@bash ./src/scripts/bazel.sh run //evolution:main -- $(OPTIONS)
 
 setup-nunet-dms:
 	@bash -x src/scripts/setup-nunet-dms.sh

src/.bazelrc

@@ -24,6 +24,8 @@ build --spawn_strategy=local
 build --define=ATOMDB_VERSION=0.8.11
 build --define=DAS_VERSION=0.9.17
 build --define=DAS_NODE_VERSION=0.0.1
+build --define=DAS_QUERY_ENGINE_VERSION=0.0.1
+
 
 # Enable debugging symbols for development
 build:debug --compilation_mode=dbg

src/evolution/BUILD

@@ -14,22 +14,20 @@ filegroup(
     srcs = glob(["**/*.py"]),
 )
 
-py_library(
-    name = "evolution",
-    srcs = [":py_all_files"],
+py_binary(
+    name = "main",
+    srcs = ["main.py"],
     deps = [
-        ":fitness_functions",
-        ":selection_methods",
-        ":utils",
-        ":optimizer",
-        "//evolution/das_node",
+      ":optimizer"
     ],
 )
 
 py_library(
     name = "fitness_functions",
     srcs = ["fitness_functions.py"],
-    deps = [],
+    deps = [
+      "//hyperon_das_atomdb:exceptions",
+    ],
 )
 
 py_library(
@@ -51,7 +49,10 @@ py_library(
         ":fitness_functions",
         ":selection_methods",
         ":utils",
-        "//evolution/das_node:das_node",
-        "//evolution/das_node:query_answer",
+        "//hyperon_das:hyperon_das",
+        "//hyperon_das_atomdb:hyperon_das_atomdb",
+        "//hyperon_das_query_engine:hyperon_das_query_engine",
+        # "//evolution/das_node:das_node",
+        # "//evolution/das_node:query_answer",
     ],
-)
+)