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snakemake-wrappers
snakemake-wrappers PublicThis is the development home of the Snakemake wrapper repository, see
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snakemake-github-action
snakemake-github-action PublicA Github action for running a Snakemake workflow
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snakemake-workflow-catalog
snakemake-workflow-catalog PublicA statically generated catalog of available Snakemake workflows
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snakemake-executor-plugin-slurm
snakemake-executor-plugin-slurm PublicA Snakemake executor plugin for submitting jobs to a SLURM cluster
Repositories
- snakemake-executor-plugin-slurm Public
A Snakemake executor plugin for submitting jobs to a SLURM cluster
snakemake/snakemake-executor-plugin-slurm’s past year of commit activity - snakemake-software-deployment-plugin-conda Public
A Snakemake software deployment plugin for using conda packages. Implemented using py-rattler.
snakemake/snakemake-software-deployment-plugin-conda’s past year of commit activity - snakemake-interface-executor-plugins Public
This package provides a stable interface for interactions between Snakemake and its executor plugins.
snakemake/snakemake-interface-executor-plugins’s past year of commit activity - snakemake-storage-plugin-fs Public
A Snakemake storage plugin that reads and writes from a locally mounted filesystem using rsync.
snakemake/snakemake-storage-plugin-fs’s past year of commit activity - snakemake-executor-plugin-ssh Public
An experimental Snakemake remote executor plugin that only requires ssh
snakemake/snakemake-executor-plugin-ssh’s past year of commit activity