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lines changed Original file line number Diff line number Diff line change @@ -49,22 +49,23 @@ rule test_aria2_file:
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"master/utils/aria2c"
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- rule test_aria2_file_with_hash :
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- input :
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- storage .http (
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- "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/869/925/GCF_000869925.1_ViralProj17181/md5checksums.txt"
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- ),
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- output :
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- "results/file.md5fileH.fas.gz" ,
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- log :
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- "logs/aria2.md5fileH.log" ,
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- params :
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- url = "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/869/925/GCF_000869925.1_ViralProj17181/GCF_000869925.1_ViralProj17181_genomic.fna.gz" ,
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- hash_function = "md5" ,
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- extra = "--file-allocation none --retry-wait 5 --console-log-level warn --log-level notice" ,
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- threads : 2
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- resources :
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- mem_mb = 1024 ,
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- runtime = 30 ,
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- wrapper :
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- "master/utils/aria2c"
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+ ### Disabled until there is a way to install 'snakemake-storage-plugin-http' in the test environment
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+ # rule test_aria2_file_with_hash:
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+ # input:
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+ # storage.http(
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+ # "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/869/925/GCF_000869925.1_ViralProj17181/md5checksums.txt"
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+ # ),
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+ # output:
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+ # "results/file.md5fileH.fas.gz",
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+ # log:
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+ # "logs/aria2.md5fileH.log",
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+ # params:
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+ # url="https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/869/925/GCF_000869925.1_ViralProj17181/GCF_000869925.1_ViralProj17181_genomic.fna.gz",
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+ # hash_function="md5",
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+ # extra="--file-allocation none --retry-wait 5 --console-log-level warn --log-level notice",
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+ # threads: 2
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+ # resources:
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+ # mem_mb=1024,
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+ # runtime=30,
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+ # wrapper:
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+ # "master/utils/aria2c"
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