Update GitHub workflow cache and fix NEWS file #109
sneumannAnnotations
1 error, 40 warnings, and 3 notices
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ubuntu-latest (devel)
Process completed with exit code 1.
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macOS-latest (devel)
File ‘mzR/libs/mzR.so’:
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macOS-latest (devel)
See below...
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macOS-latest (devel)
File ‘mzR/libs/mzR.so’:
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macOS-latest (devel)
Found the following significant warnings:
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macOS-latest (devel)
unable to access index for repository https://bioconductor.org/packages/3.21/books/bin/macosx/big-sur-arm64/contrib/4.6:
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macOS-latest (devel)
unable to access index for repository https://bioconductor.org/packages/3.21/workflows/bin/macosx/big-sur-arm64/contrib/4.6:
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macOS-latest (devel)
unable to access index for repository https://bioconductor.org/packages/3.21/data/experiment/bin/macosx/big-sur-arm64/contrib/4.6:
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macOS-latest (devel)
unable to access index for repository https://bioconductor.org/packages/3.21/data/annotation/bin/macosx/big-sur-arm64/contrib/4.6:
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macOS-latest (devel)
unable to access index for repository https://bioconductor.org/packages/3.21/bioc/bin/macosx/big-sur-arm64/contrib/4.6:
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macOS-latest (devel)
unable to access index for repository https://bioconductor.org/packages/3.21/books/bin/macosx/big-sur-arm64/contrib/4.6:
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macOS-latest (devel)
unable to access index for repository https://bioconductor.org/packages/3.21/workflows/bin/macosx/big-sur-arm64/contrib/4.6:
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macOS-latest (devel)
unable to access index for repository https://bioconductor.org/packages/3.21/data/experiment/bin/macosx/big-sur-arm64/contrib/4.6:
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macOS-latest (devel)
unable to access index for repository https://bioconductor.org/packages/3.21/data/annotation/bin/macosx/big-sur-arm64/contrib/4.6:
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macOS-latest (devel)
unable to access index for repository https://bioconductor.org/packages/3.21/bioc/bin/macosx/big-sur-arm64/contrib/4.6:
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macOS-latest (devel)
unable to access index for repository https://bioconductor.org/packages/3.21/books/bin/macosx/big-sur-arm64/contrib/4.6:
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macOS-latest (devel)
unable to access index for repository https://bioconductor.org/packages/3.21/workflows/bin/macosx/big-sur-arm64/contrib/4.6:
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macOS-latest (devel)
unable to access index for repository https://bioconductor.org/packages/3.21/data/experiment/bin/macosx/big-sur-arm64/contrib/4.6:
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macOS-latest (devel)
unable to access index for repository https://bioconductor.org/packages/3.21/data/annotation/bin/macosx/big-sur-arm64/contrib/4.6:
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macOS-latest (devel)
unable to access index for repository https://bioconductor.org/packages/3.21/bioc/bin/macosx/big-sur-arm64/contrib/4.6:
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windows-latest (devel)
Non-portable flags in variable 'PKG_CPPFLAGS':
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windows-latest (devel)
See below...
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windows-latest (devel)
Non-portable flags in variable 'PKG_CPPFLAGS':
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windows-latest (devel)
Found the following significant warnings:
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windows-latest (devel)
file 'mzR/configure' did not have execute permissions: corrected
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windows-latest (devel)
file 'mzR/cleanup' did not have execute permissions: corrected
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windows-latest (devel)
unable to access index for repository https://bioconductor.org/packages/3.21/books/bin/windows/contrib/4.6:
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windows-latest (devel)
unable to access index for repository https://bioconductor.org/packages/3.21/workflows/bin/windows/contrib/4.6:
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windows-latest (devel)
unable to access index for repository https://bioconductor.org/packages/3.21/data/experiment/bin/windows/contrib/4.6:
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windows-latest (devel)
unable to access index for repository https://bioconductor.org/packages/3.21/data/annotation/bin/windows/contrib/4.6:
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windows-latest (devel)
unable to access index for repository https://bioconductor.org/packages/3.21/bioc/bin/windows/contrib/4.6:
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windows-latest (devel)
unable to access index for repository https://bioconductor.org/packages/3.21/books/bin/windows/contrib/4.6:
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windows-latest (devel)
unable to access index for repository https://bioconductor.org/packages/3.21/workflows/bin/windows/contrib/4.6:
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windows-latest (devel)
unable to access index for repository https://bioconductor.org/packages/3.21/data/experiment/bin/windows/contrib/4.6:
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windows-latest (devel)
unable to access index for repository https://bioconductor.org/packages/3.21/data/annotation/bin/windows/contrib/4.6:
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windows-latest (devel)
unable to access index for repository https://bioconductor.org/packages/3.21/bioc/bin/windows/contrib/4.6:
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windows-latest (devel)
unable to access index for repository https://bioconductor.org/packages/3.21/books/bin/windows/contrib/4.6:
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windows-latest (devel)
unable to access index for repository https://bioconductor.org/packages/3.21/workflows/bin/windows/contrib/4.6:
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windows-latest (devel)
unable to access index for repository https://bioconductor.org/packages/3.21/data/experiment/bin/windows/contrib/4.6:
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windows-latest (devel)
unable to access index for repository https://bioconductor.org/packages/3.21/data/annotation/bin/windows/contrib/4.6:
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windows-latest (devel)
unable to access index for repository https://bioconductor.org/packages/3.21/bioc/bin/windows/contrib/4.6:
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macOS-latest (devel)
The macos-latest label will migrate to macOS 15 beginning August 4, 2025. For more information see https://github.com/actions/runner-images/issues/12520
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macOS-latest (devel)
The macos-latest label will migrate to macOS 15 beginning August 4, 2025. For more information see https://github.com/actions/runner-images/issues/12520
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windows-latest (devel)
The windows-latest label will migrate from Windows Server 2022 to Windows Server 2025 beginning September 2, 2025. For more information see https://github.com/actions/runner-images/issues/12677
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Artifacts
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Linux-biocversion-devel-r-devel-results
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156 MB |
sha256:d8d11eec8aefa3139c0e2952b88b29c57a22ed6a9ff23b4858c094a6939fafde
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