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Augustus: include stdint.h using the -include flag (fixes gcc-14 to 16) #6083

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Augustus: include stdint.h using the -include flag (fixes gcc-14 to 16) #6083

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5 changes: 5 additions & 0 deletions repos/spack_repo/builtin/packages/augustus/package.py
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Expand Up @@ -76,6 +76,11 @@ class Augustus(MakefilePackage):
# build bam2wig and 3.4.0+ links -lhts only.
conflicts("^htslib@1.10:", when="@3.3.1-tag1:3.3.2 ^samtools@:1.2")

def flag_handler(self, name, flags):
if name == "cppflags":
flags.append("-include stdint.h") # needed for gcc 14 and newer
return (flags, None, None)

def edit(self, spec, prefix):
# Set compile commands for each compiler and
# Fix for using 'boost' on Spack. (only after ver.3.3.1-tag1)
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