Add DTI measures

etc/config_process_data_dwi.json

@@ -0,0 +1,212 @@
+{
+  "path_data"   : "~/data/data.neuro.polymtl.ca/data-multi-subject",
+  "path_output" : "~/results/dwi_normative_database/dwi_normative_database_2026-04-14",
+  "script"      : "~/code/PAM50-normalized-metrics/processing_scripts/process_data_spine-generic_dwi.sh",
+  "script_args" : "--mask-method centerline --mask-size 35 --seg-method deepseg --denoise 0",
+  "jobs"        : 16,
+  "include_list" : [
+    "sub-amu01",
+    "sub-amu02",
+    "sub-amu03",
+    "sub-amu04",
+    "sub-amu05",
+    "sub-balgrist01",
+    "sub-balgrist02",
+    "sub-balgrist03",
+    "sub-balgrist04",
+    "sub-balgrist05",
+    "sub-balgrist06",
+    "sub-barcelona05",
+    "sub-barcelona06",
+    "sub-beijingGE01",
+    "sub-beijingGE02",
+    "sub-beijingGE03",
+    "sub-beijingPrisma01",
+    "sub-beijingPrisma04",
+    "sub-beijingPrisma05",
+    "sub-beijingVerio01",
+    "sub-beijingVerio02",
+    "sub-beijingVerio03",
+    "sub-brnoCeitec01",
+    "sub-brnoCeitec02",
+    "sub-brnoCeitec03",
+    "sub-brnoCeitec05",
+    "sub-brnoCeitec06",
+    "sub-brnoUhb01",
+    "sub-brnoUhb02",
+    "sub-brnoUhb03",
+    "sub-brnoUhb04",
+    "sub-brnoUhb05",
+    "sub-brnoUhb06",
+    "sub-brnoUhb07",
+    "sub-brnoUhb08",
+    "sub-cardiff01",
+    "sub-cardiff02",
+    "sub-cardiff03",
+    "sub-cardiff04",
+    "sub-cmrra01",
+    "sub-cmrra02",
+    "sub-cmrra03",
+    "sub-cmrra04",
+    "sub-cmrra05",
+    "sub-cmrra06",
+    "sub-cmrrb01",
+    "sub-cmrrb02",
+    "sub-cmrrb03",
+    "sub-cmrrb04",
+    "sub-cmrrb07",
+    "sub-dresden01",
+    "sub-dresden02",
+    "sub-fslAchieva01",
+    "sub-fslAchieva02",
+    "sub-fslAchieva03",
+    "sub-fslAchieva04",
+    "sub-fslAchieva05",
+    "sub-fslPrisma01",
+    "sub-fslPrisma03",
+    "sub-fslPrisma04",
+    "sub-fslPrisma05",
+    "sub-fslPrisma06",
+    "sub-geneva01",
+    "sub-geneva02",
+    "sub-geneva03",
+    "sub-geneva04",
+    "sub-geneva05",
+    "sub-hamburg01",
+    "sub-hamburg03",
+    "sub-hamburg04",
+    "sub-hamburg06",
+    "sub-juntendo750w01",
+    "sub-juntendo750w02",
+    "sub-juntendo750w05",
+    "sub-juntendo750w06",
+    "sub-mgh01",
+    "sub-mgh02",
+    "sub-mgh04",
+    "sub-mgh05",
+    "sub-mgh06",
+    "sub-milan01",
+    "sub-milan02",
+    "sub-milan03",
+    "sub-milan04",
+    "sub-milan05",
+    "sub-milan06",
+    "sub-milan07",
+    "sub-mniPilot1",
+    "sub-mniS01",
+    "sub-mniS02",
+    "sub-mniS03",
+    "sub-mniS04",
+    "sub-mniS07",
+    "sub-mniS08",
+    "sub-mniS09",
+    "sub-mountSinai02",
+    "sub-mountSinai05",
+    "sub-mountSinai06",
+    "sub-mpicbs01",
+    "sub-mpicbs02",
+    "sub-mpicbs03",
+    "sub-mpicbs05",
+    "sub-mpicbs06",
+    "sub-mpicbs07",
+    "sub-nottwil01",
+    "sub-nottwil02",
+    "sub-nottwil03",
+    "sub-nottwil04",
+    "sub-nottwil05",
+    "sub-nottwil06",
+    "sub-nwu02",
+    "sub-nwu03",
+    "sub-nwu04",
+    "sub-nwu05",
+    "sub-nwu06",
+    "sub-oxfordFmrib01",
+    "sub-oxfordFmrib02",
+    "sub-oxfordFmrib03",
+    "sub-oxfordFmrib04",
+    "sub-oxfordFmrib05",
+    "sub-oxfordFmrib06",
+    "sub-oxfordFmrib07",
+    "sub-oxfordFmrib10",
+    "sub-oxfordOhba01",
+    "sub-oxfordOhba02",
+    "sub-oxfordOhba03",
+    "sub-oxfordOhba04",
+    "sub-oxfordOhba05",
+    "sub-pavia02",
+    "sub-pavia03",
+    "sub-pavia04",
+    "sub-pavia06",
+    "sub-perform01",
+    "sub-perform02",
+    "sub-perform04",
+    "sub-perform05",
+    "sub-perform06",
+    "sub-queensland01",
+    "sub-queensland03",
+    "sub-queensland04",
+    "sub-queensland05",
+    "sub-sherbrooke02",
+    "sub-sherbrooke04",
+    "sub-sherbrooke05",
+    "sub-sherbrooke06",
+    "sub-sherbrooke07",
+    "sub-stanford01",
+    "sub-stanford02",
+    "sub-stanford03",
+    "sub-stanford04",
+    "sub-stanford05",
+    "sub-stanford06",
+    "sub-strasbourg01",
+    "sub-strasbourg02",
+    "sub-strasbourg03",
+    "sub-strasbourg04",
+    "sub-strasbourg05",
+    "sub-strasbourg06",
+    "sub-tehranS01",
+    "sub-tehranS02",
+    "sub-tehranS03",
+    "sub-tehranS05",
+    "sub-tehranS06",
+    "sub-tokyo750w06",
+    "sub-tokyo750w07",
+    "sub-tokyoIngenia06",
+    "sub-tokyoIngenia07",
+    "sub-tokyoSkyra06",
+    "sub-tokyoSkyra07",
+    "sub-ubc01",
+    "sub-ubc02",
+    "sub-ubc03",
+    "sub-ubc04",
+    "sub-ubc05",
+    "sub-ubc06",
+    "sub-ucdavis01",
+    "sub-ucdavis03",
+    "sub-ucdavis04",
+    "sub-ucdavis06",
+    "sub-ucdavis07",
+    "sub-ucl01",
+    "sub-ucl02",
+    "sub-ucl03",
+    "sub-ucl06",
+    "sub-unf03",
+    "sub-unf04",
+    "sub-unf05",
+    "sub-unf06",
+    "sub-unf07",
+    "sub-vallHebron01",
+    "sub-vallHebron02",
+    "sub-vallHebron03",
+    "sub-vallHebron04",
+    "sub-vallHebron05",
+    "sub-vallHebron06",
+    "sub-vuiisAchieva02",
+    "sub-vuiisAchieva04",
+    "sub-vuiisAchieva06",
+    "sub-vuiisIngenia01",
+    "sub-vuiisIngenia03",
+    "sub-vuiisIngenia04",
+    "sub-vuiisIngenia05",
+    "sub-vuiisIngenia06"
+  ]
+}