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how does arriba infer the type deletion?

Status: Open.

#267 In suhrig/arriba;

· ireneadm opened on Feb 28, 2025

Function of STAR parameter outSAMtype BAM Unsorted in Arriba run? Which GTF is suitable? How to remove gene fusion from the benign samples?

Status: Open.

#257 In suhrig/arriba;

· tanayb001 opened on Oct 26, 2024

using own fa file and gtf file error: gzip: stdin: not in gzip format

Status: Open.

#250 In suhrig/arriba;

· ppxinyi opened on Sep 5, 2024

(total=ERROR: no normal reads found

Status: Open.

#248 In suhrig/arriba;

· YasirKusay opened on Aug 24, 2024

Finding fusions and counting supporting reads zsh: killed

Status: Open.

#229 In suhrig/arriba;

· jdjdj0202 opened on Feb 2, 2024

Adding more tools to plot.

Status: Open.

#225 In suhrig/arriba;

· Nitin123-4 opened on Nov 18, 2023

Suppressed Sequences included in RefSeq_viral_genomes_v2.4.0.fa.gz

Status: Open.

#224 In suhrig/arriba;

· selkamand opened on Nov 13, 2023

Feature request: Compatibility with Starlong

Status: Open.

#218 In suhrig/arriba;

· adbeggs opened on Oct 7, 2023

Arriba for plate-based scRNA-seq

Status: Open.

#206 In suhrig/arriba;

· Silvia-Bio opened on Jul 25, 2023

Use draw_fusions.R to only output partial plots

Status: Open.

#204 In suhrig/arriba;

· t-pauli opened on Jul 14, 2023

Can one read be used to support multiple fusions

Status: Open.

#203 In suhrig/arriba;

· acloop62hz opened on Jul 10, 2023

Segmentation fault on Re-aligning chimeric reads to filter fusions

Status: Open.

#195 In suhrig/arriba;

· MelanieBroutin opened on Jun 2, 2023