Update documentation

_sources/about.md

@@ -5,14 +5,14 @@ This document was built by contributors from the SustainOSS Academic Working Gro
 ## Governance
 
 **SustainOSS** is a loose organization of people interested in holding space for discussions around the sustainability of open source. You can read more about this on [the Sustain website](https://sustainoss.org/). SustainOSS is funded through donations on Open Collective.
-  - Website: https://sustainoss.org/
-  - Discourse forum: https://sustainoss.org/
-  - Podcast: https://sustainoss.org/
-  - Open Collective: https://opencollective.com/sustainoss
-  - Slack (#sustainoss and #sustainoss-academia): https://slack.opencollective.com/
 
-The **Academic Working Group** focuses only on open source in an academic setting. It is open to everyone.
-  - Details: https://sustainoss.org/working-groups/academic-projects/
+- Website: [https://sustainoss.org/](https://sustainoss.org/)
+- Discourse forum: [https://discourse.sustainoss.org/](https://discourse.sustainoss.org/)
+- Podcast: [https://podcast.sustainoss.org/](https://podcast.sustainoss.org/)
+- Open Collective: [https://opencollective.com/sustainoss](https://opencollective.com/sustainoss)
+- Slack (#sustainoss and #sustainoss-academia): [https://slack.opencollective.com/](https://slack.opencollective.com/)
+
+The [**Academic Working Group**](https://sustainoss.org/working-groups/academic-projects/) focuses only on open source in an academic setting. It is open to everyone.
 
 [Richard Littauer](https://burntfen.com) is one of the facilitators and organizers for the academic working group – he can be reached at [[email protected]](mailto:[email protected]). [Clare Dillon](https://ie.linkedin.com/in/claredillon) and [Sayeed Choudhury](https://www.linkedin.com/in/sayeed-choudhury-4184015/) are coorganizers. Currently, they are funded through an Alfred P. Sloan grant for this and other community work.
 
@@ -28,4 +28,4 @@ All of the work here is done under the SustainOSS [Code of Conduct](https://sust
 
 ## License
 
-All of the work here is licensed under an [MIT License](./LICENSE), with the copyright held by the contributors. 
+All of the work here is licensed under an [MIT License](./LICENSE), with the copyright held by the contributors.

_sources/individuals.md

@@ -1,6 +1,6 @@
 # Individuals
 
-As with so many other fields, open source in academia is ofter driven by individuals, as opposed to permanent projects and institutions. Especially with hyperconnectors, knowing who to talk to and their context can be invaluable. While this website can never hope to be a rolodex of everyone relevant in the field of open source software in academia, having some pages here can potentially be useful. 
+As with so many other fields, open source in academia is ofter driven by individuals, as opposed to permanent projects and institutions. Especially with hyperconnectors, knowing who to talk to and their context can be invaluable. While this website can never hope to be a rolodex of everyone relevant in the field of open source software in academia, having some pages here can potentially be useful.
 
 If you have shown up for a SustainOSS Academic Working Group call and if you would like to have yourself listed here as someone interested in open source in academia, please add your information below. This list is both publicly available and editable; feel free to make a PR to add or remove yourself at any time.
 
@@ -12,4 +12,3 @@ _To keep it simple, limit your details to one paragraph, starting with your name
 
 - Richard Littauer. SustainOSS organizer and podcast host, former organizer of OSPO++. Alumn of Edinburgh University and Saarland University. [Personal website](https://burntfen.com), [LinkedIn](https://www.linkedin.com/in/richard-littauer-130026138/), and email at [[email protected]](mailto:[email protected]).
 - Philip Durbin. Developer at Harvard University. Core contributor to [Dataverse](https://dataverse.org). Creator of the [Open Source at Harvard](https://doi.org/10.7910/DVN/TJCLKP) dataset. [Personal website](http://greptilian.com), [LinkedIn](https://www.linkedin.com/in/pdurbin/), and email at [[email protected]](mailto:[email protected])
-

_sources/intro.md

@@ -4,7 +4,7 @@ This notebook is an aid for navigating the ecosystem of open source within acade
 
 Open source software is everywhere. In an academic context, it can be used either for research software, within an ed tech context used by the administration, or as a topic of instruction to students. Open source also is built into all layers of software used by academics, as well of industry at large. It can also be an object of study for researchers seeking to learn more about code generation and usage, collaborative networks, and so on.
 
-The many areas where open source can apply means that navigating the landscape of open source software can be difficult to practitioners looking to specialize in open source as a whole. 
+The many areas where open source can apply means that navigating the landscape of open source software can be difficult to practitioners looking to specialize in open source as a whole.
 
 [SustainOSS](https://sustainoss.org) is a community of people who hold space for conversations around the long term sustainability of both open source code and the communities that build and use it. As part of this work, the Academic working group meets in order to discuss sustainability issues within open source. This website is meant to function as a starting point for discussions and links to other communities, universities, and researchers working on open source, and as a list of resources for practictioners.
 
@@ -17,15 +17,15 @@ At its heart, this is a simple Jupyter notebook that can display information in
 At the moment, we have these sections:
 
 - [Universities](./universities.md). This is meant to cover universities which have a formal relationship with open source. While many universities have an open access or open research policy, sometimes publicly available, and while many universities have researchers who use or work on open source, only a few universities have allocated funding for a lab, department, library resources, or staff to work on open source issues. Sometimes, this takes the form of an Open Source Program Office (OSPO), but not always, and this appelation covers a variety of tasks that the university may already be doing in a formal manner.
-- [Organizations](./organizations.md). There are many groups which work on open source within an academic or research context. Sometimes, these are foundations which do work academically - or, they could just be user groups or special interest groups that meet to discuss in a less formal manner. 
+- [Organizations](./organizations.md). There are many groups which work on open source within an academic or research context. Sometimes, these are foundations which do work academically - or, they could just be user groups or special interest groups that meet to discuss in a less formal manner.
 - Practictioners. _Do we want this?_
 
 ## Contribute
 
 This work cannot be done by a single person or a single team. There are several ways to contribute:
 
-- [**Open an issue**](https://github.com/sustainers/academic-map/issues/new) to add data. If you are unsure how to use Git easily or you are unsure where something goes, just open an issue with your suggestions or comments. 
-- Add a page directly to the Git repository using a **Pull Request**. The GitHub repo is [here](https://github.com/sustainers/academic-map/). If you have a university, community, or so on, and you know how to use Git and GitHub, please open a PR with the resource! 
+- [**Open an issue**](https://github.com/sustainers/academic-map/issues/new) to add data. If you are unsure how to use Git easily or you are unsure where something goes, just open an issue with your suggestions or comments.
+- Add a page directly to the Git repository using a **Pull Request**. The GitHub repo is [here](https://github.com/sustainers/academic-map/). If you have a university, community, or so on, and you know how to use Git and GitHub, please open a PR with the resource!
 - **Complain**. If this isn't working for you, tell us why, and we'd be more than happy to work to make it better.
 - **Join** the regular calls. We meet every fourth Thursday. These are announced in [the Sustain Discourse](https://discourse.sustainoss.org/).
 - **Send an email.** Richard Littauer is the main editor for this repository, at the moment, and he's happy to incorporate any changes or to build a more welcoming and inclusive structure for collaboration here if any of the above options is less than ideal. Email [[email protected]](mailto:[email protected]).

_sources/organizations.md

@@ -1,6 +1,6 @@
 # Communities and Organizations
 
-Open source in academia is often driven by communities and non-profit organizations that work across institutions, fields, and boundaries. 
+Open source in academia is often driven by communities and non-profit organizations that work across institutions, fields, and boundaries.
 
 ## Foundations and Fiscal Hosts
 
@@ -9,10 +9,10 @@ Sorted alphabetically.
 - [Apereo](https://www.apereo.org/)
 - [Code for Science and Society](https://www.codeforsociety.org/)
 - [Community Initiatives](https://communityinitiatives.org/)
-- [Eclipse Foundation](https://www.eclipse.org/) 
+- [Eclipse Foundation](https://www.eclipse.org/)
 - [Invest in Open Infrastructure](https://investinopen.org/)
 - [Linux Foundation](https://www.linuxfoundation.org/)
-- [NumFOCUS](https://numfocus.org) 
+- [NumFOCUS](https://numfocus.org)
 - [Open Collective](https://opencollective.com)
   - [Open Source Collective](https://www.oscollective.org/)
   - [Open Collective Foundation](https://opencollective.foundation/)
@@ -33,5 +33,3 @@ Sorted alphabetically.
 ## Unsorted
 
 - HELIOS
-
-

_sources/organizations/chaoss.md

@@ -1,6 +1,6 @@
 # CHAOSS
 
-*Homepage*: https://chaoss.community/
+*Homepage*: [https://chaoss.community/](https://chaoss.community/)
 *Contact*: Matt Germonprez
 
 CHAOSS is a community of mixed academics and industry professionals working on defining usable metrics for open source community health (CHAOSS stands for Community Health Analytics in Open Source Software). They have [several working groups](https://chaoss.community/kb/working-groups/), including an OSPO and a University working group. Their work comes partially out of the Universities of Nebraska and Missouri, through [Matt Germonprez](https://www.unomaha.edu/college-of-information-science-and-technology/about/faculty-staff/matt-germonprez.php) and [Sean Goggins](https://engineering.missouri.edu/faculty/sean-patrick-goggins/). The group is funded and hosted by the Linux Foundation as well as Alfred P. Sloan.

_sources/organizations/urssi.md

@@ -1,3 +1,3 @@
 # URSSI
 
-https://urssi.us/
+[https://urssi.us/](https://urssi.us/)

_sources/universities.md

@@ -4,19 +4,19 @@ University involvement in open source varies widely. For instance, a university
 
 The following universities have some involvement in open source:
 
-  - [Carnegie Mellon University](./universities/carnegie-mellon-university.md)
-  - [Georgia Institute of Technology](./universities/georgia-institute-of-technology.md)
-  - [Johns Hopkins University](./universities/johns-hopkins-university.md)
-  - [Rey Juan Carlos University](./universities/rey-juan-carlos-university.md)
-  - [Oregon State University](./universities/oregon-state-university.md)
-  - Rochester Institute of Technology
-  - [Stanford University](./universities/stanford-university.md)
-  - [Trinity College Dublin](./universities/trinity-college-dublin.md)
-  - [UC Santa Cruz](./universities/university-of-california-santa-cruz.md)
-  - University of Texas Austin
-  - [University of Vermont](./universities/university-of-vermont.md)
-  - [Oregon State University](./universities/oregon-state-university.md)
-  - [University of Wisconsin-Madison](./universities/university-of-wisconsin-madison.md)
+- [Carnegie Mellon University](./universities/carnegie-mellon-university.md)
+- [Georgia Institute of Technology](./universities/georgia-institute-of-technology.md)
+- [Johns Hopkins University](./universities/johns-hopkins-university.md)
+- [Rey Juan Carlos University](./universities/rey-juan-carlos-university.md)
+- [Oregon State University](./universities/oregon-state-university.md)
+- Rochester Institute of Technology
+- [Stanford University](./universities/stanford-university.md)
+- [Trinity College Dublin](./universities/trinity-college-dublin.md)
+- [UC Santa Cruz](./universities/university-of-california-santa-cruz.md)
+- University of Texas Austin
+- [University of Vermont](./universities/university-of-vermont.md)
+- [Oregon State University](./universities/oregon-state-university.md)
+- [University of Wisconsin-Madison](./universities/university-of-wisconsin-madison.md)
 
 ## Labs
 

_sources/universities/carnegie-mellon-university.md

@@ -2,7 +2,7 @@
 
 - *OSPO*: Yes, in the Library.
 - *Personnel*: Sayeed Choudhury, Thomas Hughes
-- *Link*: https://www.library.cmu.edu/service/ospo
+- *Link*: [https://www.library.cmu.edu/service/ospo](https://www.library.cmu.edu/service/ospo)
 - *Member of*: [HELIOS](https://www.heliosopen.org/members), [Carpentries](https://carpentries.org/members/)
 
 ## General Description

_sources/universities/georgia-institute-of-technology.md

@@ -2,9 +2,9 @@
 
 - *OSPO*: Yes
 - *Personnel*: Jeffrey Young, Fang Liu, Ron Rahaman, Alessandro Orso, Susan Parham
-- *Link*: https://ospo.cc.gatech.edu/
+- *Link*: [https://ospo.cc.gatech.edu/](https://ospo.cc.gatech.edu/)
 
-##  General Description
+## General Description
 
 The open source programs office (OSPO) raises awareness and capacity for open source software to better develop, manage, curate, and share it for research, education, translation, and broader impact.
 

_sources/universities/johns-hopkins-university.md

@@ -1,32 +1,30 @@
 # Johns Hopkins University
 
-
 - *OSPO*: Yes, in the Library.
 - *Personnel*: Bill Branan, Megan Forbes
-- *Link*: https://drcc.library.jhu.edu/open-source-programs-office/
+- *Link*: [https://drcc.library.jhu.edu/open-source-programs-office/](https://drcc.library.jhu.edu/open-source-programs-office/)
 - *Member* of: [Eclipse Foundation](https://www.eclipse.org), [OSPO++](https://ospoplusplus.org/)
 
 ## General Description
 
 The Johns Hopkins University Open Source Programs Office (OSPO) is a team of experts dedicated to helping the JHU community make the most of open source software. We believe open source software is a powerful tool for solving global problems, and we are here to support its use and development at JHU.
 
-We do this by providing education and resources, curating open source software developed by JHU faculty, staff, and students, defining and sharing best practices, and illustrating the value of open source software developed at JHU. 
+We do this by providing education and resources, curating open source software developed by JHU faculty, staff, and students, defining and sharing best practices, and illustrating the value of open source software developed at JHU.
 
 ## Core Objectives
-
-- Building awareness of the value and impact of open source within the university.  
-- Providing resources, tools, and engineering support to promote the use of open source within the university's academic community. 
-- Supporting the participation of faculty, staff, and students in open source through educational programs, information sharing, and guidance on best practices. 
-- Encouraging the translation of academic discovery into products and services that generate social impact in addition to commercial success. 
 
-## Primary Contacts 
+- Building awareness of the value and impact of open source within the university.
+- Providing resources, tools, and engineering support to promote the use of open source within the university's academic community.
+- Supporting the participation of faculty, staff, and students in open source through educational programs, information sharing, and guidance on best practices.
+- Encouraging the translation of academic discovery into products and services that generate social impact in addition to commercial success.
+
+## Primary Contacts
 
 - Bill Branan, Manager, Digital Research and Curation Center, Sheridan Libraries
 - Megan Forbes, Program Manager, Open Source Programs Office
 
 ## Other Context
 
-The Digital Research and Curation Center at Johns Hopkins University launched the first US university-based OSPO by working with open source companies and foundations with the goal of establishing a model for other universities. 
-
+The Digital Research and Curation Center at Johns Hopkins University launched the first US university-based OSPO by working with open source companies and foundations with the goal of establishing a model for other universities.
 
-The JHU OSPO is supported by the [Alfred P. Sloan Foundation](http://sloan.org/).
+The JHU OSPO is supported by the [Alfred P. Sloan Foundation](http://sloan.org/).

_sources/universities/oregon-state-university.md

@@ -2,10 +2,10 @@
 
 - *OSPO*: Yes
 - *Personnel*: Lance Albertson
-- *Link*: https://osuosl.org/
+- *Link*: [https://osuosl.org/](https://osuosl.org/)
 - *Member of*: [HELIOS](https://www.heliosopen.org/members)
 
-##  General Description
+## General Description
 
 The lab, in partnership with the School of Electrical Engineering and Computer Science at Oregon State University, provides hosting for more than 160 projects, including those of worldwide leaders like the Apache Software Foundation, the Linux Foundation and Drupal. The lab partners with industry leaders and policy makers to bring open source technologies to new sectors, including education, health and government.
 
@@ -17,8 +17,8 @@ The lab, in partnership with the School of Electrical Engineering and Computer S
 
 ## Primary Contacts
 
-- Lance Albertson,*Director*
+- Lance Albertson, *Director*
 
 ## Other context
 
-The Oregon State Business Solutions Group and OSL have partnered to form the Center for Applied Systems and Software (CASS) within the EECS school. Throughout the whole project lifecycle, including design, development, testing, and hosting, CASS offers its clients services. Through this collaboration, each organization is able to keep their distinct identity while pooling their knowledge and resources to take on more ambitious projects.
+The Oregon State Business Solutions Group and OSL have partnered to form the Center for Applied Systems and Software (CASS) within the EECS school. Throughout the whole project lifecycle, including design, development, testing, and hosting, CASS offers its clients services. Through this collaboration, each organization is able to keep their distinct identity while pooling their knowledge and resources to take on more ambitious projects.

_sources/universities/rey-juan-carlos-university.md

@@ -1,7 +1,7 @@
 # Rey Juan Carlos University
 
 - *OSPO*: Yes, under the office of knowledge and free culture
-- *Link*: https://ofilibre.gitlab.io/
+- *Link*: [https://ofilibre.gitlab.io/](https://ofilibre.gitlab.io/)
 
 ## General Description
 

_sources/universities/saint-louis-university.md

@@ -2,7 +2,7 @@
 
 - *OSPO*: Yes, in the Library.
 - *Personnel*: Daniel Shown
-- *Link*: https://oss-slu.github.io/
+- *Link*: [https://oss-slu.github.io/](https://oss-slu.github.io/)
 - *Member of*: [HELIOS](https://www.heliosopen.org/members)
 
 ## General Description
@@ -12,12 +12,12 @@ Open Source with SLU was established to help SLU researchers with their custom s
 ## Core Objectives
 
 - Support open scholarship.
-- Deliver value for researchers with software and tools 
+- Deliver value for researchers with software and tools
 - Provide students with realistic software development experience.
 
 ## Primary Contacts
 
--  Daniel Shown, *Program Director*
+- Daniel Shown, *Program Director*
 
 ## Other context