Tracking v2: explanation system, CLI, and repo cleanup#38
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- InstanceExplanationStore with per-instance decision records - Explanation generators for motion, directional, RFID, tail, and stitch decisions - SLPT file format (.slpt) preserving tracking metadata across save/load - TailFeatureTracker with PCA + k-means identity matching - VisualPatchTracker for visual re-identification - CoordinateRFIDTracker with coordinate-based RFID matching - GeneralOnlineTracker with configurable feature extractors and scorers - TrackletStitcher for merging fragmented tracklets - Expanded MotionTracker, DirectionalMotionTracker, FacingConsistencyTracker - Metrics output and types for layer attribution analysis Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>
- sleap-mot run config.yaml command with YAML-based pipeline config
- Variable interpolation (${input.video}) and automatic param routing
- Tracker registry mapping short names to classes
- CLI overrides for labels, video, output paths
- Add pyyaml and click dependencies, add project.scripts entry point
- README: CLI usage docs, config format, available trackers table
Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>
- Move tracker.py, track_instance.py, feature_tracker.py, candidates/ to _legacy/ - Update internal imports within legacy modules - Update old tests to import from _legacy - Clean sleap_mot/__init__.py to expose only current API Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>
- test_tracking.py: TrackContext, InstanceExplanationStore, MotionTracker, TrackletStitcher, GeneralOnlineTracker (14 tests) - test_io.py: SLPTFile save/load roundtrip, statistics, pipeline metadata (5 tests) - test_pipeline.py: config loading, validation, interpolation, param splitting, registry (15 tests) - Add __init__.py for feature_tracking/ and processing/ packages Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>
- Remove unused framework boilerplate (Django, Flask, Scrapy, Celery, etc.) - Add .claude/ to ignored paths - Remove hardcoded file paths, use patterns instead Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>
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Summary
InstanceExplanationStorewith per-instance decision records for motion, directional, RFID, tail, and stitch decisions.slptarchive preserving tracking metadata (contexts, explanations, pipeline info) across save/load cyclessleap-mot run config.yamlwith YAML-based multi-layer pipeline config, variable interpolation, automatic param routingtracker.py,track_instance.py,candidates/) moved tosleap_mot/_legacy/.gitignore, deleted junk files, added missing__init__.pyfilesTest plan
pytest tests/ -v)sleap-mot runend-to-end on a real dataset.slptoutput contains explanations from all layers--save-slpproduces both files--labels,--video,--output) work🤖 Generated with Claude Code