v0.6.0 — Process logging for dialogic reflexivity

Added

• Process logging infrastructure — captures epistemically significant moments in researcher-AI dialogue (corrections, redirections, rejections, discoveries, conventions)
• log_process_event — manual logging with researchers exact words (in vivo)
• log_session_end — session summary with key decisions and unresolved questions
• Auto-logging: session_start in code_start/review_start, codes_written in code_write_segment, codes_revised in review_revise_codes
• methodology/dialogic_reflexivity.md — theoretical foundations (Bakhtin, Gadamer, Schon, postphenomenology)
• All auto-logging is best-effort — primary operations never fail due to logging

v0.5.2

Added

• phase3_extract_codes — extracts all codes from coded transcripts into markdown, grouped by RQ and level
• write_file — saves analytical work between sessions (candidate themes, maps, definitions, reports). Closes the persistence gap for Phase 3-6.

Fixed

• rta_config.yaml transcript status now updates during coding workflow
• MethodologyLoader returns correct documents for Phase 4-6
• Fallback texts updated to current code format
• Template cleaned of project-specific references

Changed

• All phases (2a-6) now report available in init output
• .gitignore covers .claude/ and .cursor/

v0.5.0 — Public release

What changed

Project identity reframed: methodology as core, tools as infrastructure. All public documentation now presents the methodology suite as the intellectual substance of the project, with file operations explicitly secondary.

Documentation

• README.md completely rewritten for researcher audience — opens with the research problem, not the technology
• RESEARCH_WORKFLOW.md — new document covering the researcher's complete analytical journey
• GETTING_STARTED.md rewritten with Linux support, verification steps, and troubleshooting
• ROADMAP.md rewritten from 655 lines of internal planning to 50 focused lines
• API.md — orienting introduction added for researchers
• CONTRIBUTING.md — project structure section explaining methodology/protocols/tools separation
• init-instructions.md — methodology engagement elevated to primary instruction; Phase 2b tools added

Tools (since v0.4.0)

• Phase 2b critical review — segment-by-segment review, reflexive note-taking, code revision with audit trail
• Segment restructuring — split and merge segments during review with automatic note synchronisation
• Methodology enforcement — Phase 2b methodology must be displayed before review begins

Repository

• Renamed from MPC_RTA to reflexive-thematic-analysis-mcp
• All Dependabot vulnerabilities resolved
• Internal development documents archived; public docs only

Removed

• docs/USER_GUIDE.md — replaced by RESEARCH_WORKFLOW.md
• Internal RFCs, design docs, and utility scripts removed from public repository