Motion capture (markerless 3D pose estimation) pipeline and helper GUI for tethered Drosophila.

A neuromechanical model of adult Drosophila melanogaster.

Sequential inverse kinematics pipeline.

Custom codes for Flysta3D paper.

Toolkit for trajectory data processing, network construction and analysis

Tracking, classification, and analysis tools for courtship in the fly.

Tutorial for RNA sequence data processing and simple downstream analysis with Drosophila melanogaster

Repository for RDN-WDP paper

Python and R pipeline to predict sgRNA efficiency in D.mel via machine learning algorithms trained and optimized on CRIPSR pooled gene essentiality screens

Analysis of clock neurons in Hemibrain data

Original data and analysis code for Carreira-Rosario et al. "Mechanosensory input during circuit formation shapes Drosophila motor behavior through Patterned Spontaneous Network Activity", Current Biology 2021.

Packaged and versioned Analysis functions for Shahar's cells

Data package for Drosophila melanogaster RNA-seq

Machine learning framework for aging analysis in Drosophila single-cell RNA-seq data. Deep learning models with SHAP interpretability, batch correction, and comprehensive research workflows.

Drosophila melanogaster IndSeq and PoolSeq genomics data in Asia and Europe

Shiny app for screening for core promoter occurrences close to expressed transposons TSSs.

This repo contains code implementation from paper "Automated identification of social interaction criteria in Drosophila melanogaster"

Source code for "Coupling dynamics of 2D Notch-Delta signalling", by Francisco Berkemeier and Karen M. Page

rna-seq pipeline for drosophila melanogaster: qc, trimming, alignment, and read counting (81.7% alignment, ~50m bp processed)

Virtual Fly Brain blog and documentation site