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varchasvee108 / cell-fate-trajectories

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Modeling cell differentiation as continuous developmental flow through pseudotime instead of static clusters. Inspired by Waddington’s epigenetic landscape with interactive trajectory, branching, and uncertainty visualizations.

bioinformatics transformers computational-biology scrna-seq dynamical-systems developmental-biology trajectory-prediction single-cell-rna-seq waddington pseudotime trajectory-sequences waddington-landscape
  • Updated May 11, 2026
  • Python

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