Add proper support for inactive points

[efaulhaber]

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[codecov]

Codecov Report

Attention: Patch coverage is 86.66667% with 2 lines in your changes missing coverage. Please review.

Project coverage is 89.02%. Comparing base (a65dc9a) to head (9ba598c).
Report is 2 commits behind head on main.

Files with missing lines	Patch %	Lines
src/nhs_grid.jl	83.33%	2 Missing ⚠️

Additional details and impacted files

@@            Coverage Diff             @@
##             main     #107      +/-   ##
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- Coverage   89.27%   89.02%   -0.25%     
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  Files          13       13              
  Lines         550      556       +6     
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+ Hits          491      495       +4     
- Misses         59       61       +2     

Flag	Coverage Δ
unit	89.02% <86.66%> (-0.25%)	⬇️

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[Copilot]

Pull Request Overview

This PR adds support for inactive points in neighborhood searches by introducing a new keyword parameter that restricts the active indices from the provided coordinate arrays. Key changes include:

• Updating test cases to verify behavior with inactive points using a specified index range.
• Modifying various neighborhood search initialization and update functions (in both grid and precomputed implementations) to accept the new eachindex_y parameter.
• Adjusting the core grid search functions to enforce constraints on inactive point handling.

Reviewed Changes

Copilot reviewed 5 out of 5 changed files in this pull request and generated 1 comment.

Show a summary per file

File	Description
test/nhs_grid.jl	Updated tests to pass a specific indices range (eachindex_y) for inactive points.
src/nhs_trivial.jl	Added eachindex_y parameter to the trivial search initialization and update functions.
src/nhs_precomputed.jl	Introduced eachindex_y in initialization and update functions and propagated it to neighbor list setup.
src/nhs_grid.jl	Modified grid initialization and update functions to support selective point processing with eachindex_y.
src/neighborhood_search.jl	Extended abstract functions to include eachindex_y for proper inactive point support.

Comments suppressed due to low confidence (2)

src/nhs_trivial.jl:37

• [nitpick] Consider renaming the parameter 'eachindex_y' to a more descriptive name like 'active_indices' to clarify its role in specifying which points to use.

eachindex_y = axes(y, 2)

src/nhs_grid.jl:215

• [nitpick] Verify that the added bounds check does not introduce significant performance overhead in critical sections; consider conditional enabling for production builds if needed.

@boundscheck checkbounds(y, eachindex_y)

[LasNikas]

Thanks a lot! LGTM!