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Release 1.4.6

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@zhuchcn zhuchcn released this 21 May 16:52
· 104 commits to main since this release
v1.4.6
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[1.4.6] - 2025-05-21

  • Fixed biopython version #908

[1.4.6-rc4] - 2025-03-18

  • Added the support for wildcard characters in splitFasta. #906

[1.4.6-rc3] - 2025-03-10

  • Added --skip-failed flag to callVariant, parseArriba, parserSTARFusion, parseFusionCatcher.

  • Added tally table to parseREDITools, parseCIRCExplorer, and parseRMATS

[1.4.6-rc2] - 2025-03-03

Fixed

  • Fixed callVariant that variant bubble not identified correctly.

  • Fixed parseVEP that failed records will now be skipped with --skip-failed. #902

  • Fixed callVariant with variant bubble finding error starting from a out-bridge node.

  • Fixed callVariant that peptide annotation not created correctly with SEC

Changed

  • A check added when converting a genomic location to gene coordinate to ensure they overlap.

[1.4.6-rc1] - 2025-02-24

Fixed

  • Fix callVariant for a case that a bridge-out node was not identified correctly with a lot of framshift variants.
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