·
126 commits
to master
since this release
This is the v478 release of the UCSC Genome Browser. A summary of the relevant code changes includes:
- Added sort option to bedToBigBed utility.
- Added a cart rewrite for the new Splicing Impact supertrack.
- Explain how to download big* files on the Table Browser schema page.
- Added support for quickLifting mySQL beds, including custom tracks.
- Added ability to turn off table name based handling in CGIs per track will default to type based handling.
- Do not create a hub on invocation of hgCollection. This should reduce number of empty hubs.
- Fixed another prop() vs attr() jquery upgrade bug, this time when turning on subtracks.
- Fixed minor hgTracks imageV2 bug - add one only if we are drawing center labels.
- hgConvert will now report when it's unable to find a chain file instead of crashing (this is very rare).
- GBiB will now update from a frozen binary set until we make it compatible with our new compilation setup.
- sqlTableSize return value switched from int to long type to support tables with more than 2^31 rows.
- Removed sandbox commands from our mariadb table dumps for better compatibility with older mariadb and mysql installations.
- Proof of concept preview of contributed tracks to GenArk hubs working out of /gbdb/ hierarchy.
- Working toward getting GenArk hubs to function out of the /gbdb/ local filesystem.
- Fixed file path security concern in hgEncodeVocab.
- Improvements to wuhCor1 big tree build process.