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  • Unit of Process Control & Informatics
  • Athens, Greece
  • LinkedIn in/vminadakis

Achievements

Achievement: Pull Sharkx2Achievement: QuickdrawAchievement: Pair ExtraordinaireAchievement: Arctic Code Vault Contributor

Achievements

Achievement: Pull Sharkx2Achievement: QuickdrawAchievement: Pair ExtraordinaireAchievement: Arctic Code Vault Contributor

Highlights

  • Pro

Organizations

@ntua-unit-of-control-and-informatics

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vassilismin/README.md

👋 Hi, I’m Vassilis Minadakis

I’m a Machine Learning Engineer and current PhD Candidate at NTUA.
My work focuses on applying AI and computational modeling to chemistry, toxicology, and pharmacokinetics.

🔬 Research & Development

  • Developer of jaqpotpy, a Python package for building, packaging (ONNX), and deploying ML models on the Jaqpot platform.
  • Experience with Physics-Informed Neural Networks (PINNs) for parameter estimation in kinetic and PBK models.
  • Developed QSAR models using classical machine learning methods to predict properties of potentially toxic substances.
  • Background in physiologically based kinetic (PBK) modeling for nanoparticles, PFAS and other chemical substances.

📚 Current Focus

  • Expanding knowledge and hands-on practice in Natural Language Processing (NLP), transformers, and emerging AI technologies.
  • Exploring their intersection with chemistry and computational modeling.

⚡ Tech Stack

Python
PyTorch
scikit-learn
R
Julia

🌱 Interests

Always looking to collaborate at the intersection of machine learning, chemistry, and computational modeling.

📫 Connect with me

LinkedIn
Email

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  1. ntua-unit-of-control-and-informatics/jaqpotpy ntua-unit-of-control-and-informatics/jaqpotpy Public

    Open-source Python client for deploying machine learning models and obtaining predictions via the Jaqpot API.

    Python 19 1

  2. ntua-unit-of-control-and-informatics/IndusChemFate_PBTK_R_Implementation ntua-unit-of-control-and-informatics/IndusChemFate_PBTK_R_Implementation Public

    R implementation of the IndusChemFate PBPK model for chemical fate and exposure assessment.

    Jupyter Notebook 1

  3. ntua-unit-of-control-and-informatics/PFAS_PBK_models ntua-unit-of-control-and-informatics/PFAS_PBK_models Public

    This repository contains code for developing PBK model for PFAS under the SCENARIOS H2020 project

    R 2

  4. BCF_Fish_QSAR_Model BCF_Fish_QSAR_Model Public

    Python

  5. ntua-unit-of-control-and-informatics/QSAR_PFAS ntua-unit-of-control-and-informatics/QSAR_PFAS Public

    This model contains code and data for developing QSAR models in the SCENARIOS project

    Jupyter Notebook 1