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Pull requests: vgteam/vg
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Allow duplicates to not count against multiplicity
#5033
opened Sep 9, 2026 by
faithokamoto
Contributor
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Special treatment for GRef references in vg haplptypes
#5030
opened Sep 8, 2026 by
glennhickey
Contributor
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Automatic manapge generation with
vg help --man
#5018
opened Aug 21, 2026 by
faithokamoto
Contributor
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test: strip BSD wc padding so the test suite is usable on macOS
#5003
opened Aug 8, 2026 by
benedictpaten
Contributor
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call: add opt-in read-level genotype likelihoods (--read-likelihood)
#4990
opened Jul 29, 2026 by
benedictpaten
Contributor
•
Draft
vg surject: prune anchors in mapper-declared tail regions
#4986
opened Jul 29, 2026 by
Sagorikanag
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Promote secondary when primary alignment fails to surject
#4973
opened Jul 20, 2026 by
gaoj66-roche
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Allow long-read Giraffe to take self-loops/reversals between seeds
#4953
opened Jul 1, 2026 by
faithokamoto
Contributor
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Use vg WDL that gives RTG a defined memory limit
#4918
opened May 29, 2026 by
adamnovak
Member
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[WIP] add tag for allele number to call output
#4665
opened Jul 23, 2025 by
glennhickey
Contributor
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Keep haplotypes in
vg chunk that don't extend far enough
#4501
opened Jan 21, 2025 by
adamnovak
Member
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