Skip to content
@wells-wood-research

Wells Wood Research Group

Software developed by the Wells Wood Research Group, University of Edinburgh

Pinned Loading

  1. BAlaS BAlaS Public

    Source code for the BUDE Alanine Scan web application.

    Elm 12 3

  2. isambard isambard Public

    Forked from isambard-uob/isambard

    Intelligent System for Analysis, Model Building And Rational Design of biomolecules.

    Python 1

  3. de-stress de-stress Public

    DE-STRESS is a model evaluation pipeline that aims to make protein design more reliable and accessible.

    C++ 30 1

  4. PDBench PDBench Public

    PDBench is a dataset and software package for evaluating fixed-backbone sequence design algorithms.

    Python 32

  5. drMD drMD Public

    Molecular Dynamics for Experimentalists

    Python 66 5

  6. protein-design-archive protein-design-archive Public

    Source code for The Protein Design Archive web application.

    Elm 9 2

Repositories

Showing 10 of 34 repositories
  • CHOPshop_MD Public

    Open Source Repo for Molecular Dynamics Analysis Scripts

    wells-wood-research/CHOPshop_MD’s past year of commit activity
    Python 3 MIT 0 0 0 Updated Feb 11, 2026
  • protein-design-archive Public

    Source code for The Protein Design Archive web application.

    wells-wood-research/protein-design-archive’s past year of commit activity
    Elm 9 2 29 (6 issues need help) 0 Updated Feb 10, 2026
  • chronowska-stam-wood-2024-protein-design-archive Public

    Code supporting the Protein Design Archive (PDA) database publication

    wells-wood-research/chronowska-stam-wood-2024-protein-design-archive’s past year of commit activity
    Jupyter Notebook 16 MIT 3 0 1 Updated Feb 5, 2026
  • drFrankenstein Public

    Fast Parameterisation of Complex Molecules for the AMBER forcefield

    wells-wood-research/drFrankenstein’s past year of commit activity
    Rich Text Format 2 0 0 0 Updated Jan 28, 2026
  • tessera Public

    (Work in Progress) A high-performance Python library for representing proteins as sets or graphs of evolutionarily conserved fragments.

    wells-wood-research/tessera’s past year of commit activity
    Jupyter Notebook 2 0 0 0 Updated Jan 23, 2026
  • prometheozyme Public
    wells-wood-research/prometheozyme’s past year of commit activity
    Python 1 0 0 0 Updated Jan 21, 2026
  • wells-wood-research.github.io Public

    Group website.

    wells-wood-research/wells-wood-research.github.io’s past year of commit activity
    Elm 0 0 0 7 Updated Jan 11, 2026
  • MUTANT_ZOO Public

    Keep Track of Your Mutants!

    wells-wood-research/MUTANT_ZOO’s past year of commit activity
    Python 0 MIT 1 0 1 Updated Jan 8, 2026
  • drMD Public

    Molecular Dynamics for Experimentalists

    wells-wood-research/drMD’s past year of commit activity
    Python 66 MIT 5 1 0 Updated Nov 18, 2025
  • timed-design Public

    Protein Sequence Design with Deep Learning and Tooling like Monte Carlo Sampling and Analysis

    wells-wood-research/timed-design’s past year of commit activity
    Python 63 13 8 1 Updated Oct 28, 2025

Top languages

Loading…