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1. assemble-solanum-genome assemble-solanum-genome Public

   This repository is to record the scripts to assemble and annotate some plant genomes in the genus Solanum. The scripts are aimed to be reproducible that can be used in other plant genome projects. …

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2. JaltGenome JaltGenome Public

   Raw scripts for de novo assembling a Jaltomata genome. Publication: Wu, M., Kostyun, J. and Moyle, L., 2018. Genome sequence of Jaltomata addresses rapid reproductive trait evolution and enhances c…

   Python 9 7

3. JaltPhylo JaltPhylo Public

   Raw scripts for the Jaltomata phylogenomics project. Publication: Wu, M., Kostyun, J. L., Hahn, M. W., & Moyle, L. C. (2018). Dissecting the basis of novel trait evolution in a radiation with wides…

   Python 6 5

4. solanum-gene-expression solanum-gene-expression Public

   A project to compare evolutionary rate of tissue-specific genes among closely related species

   R 1 1

5. I529-Group-Projects I529-Group-Projects Public

   Forked from wrshoemaker/I529-Group-Projects

   A repository for my class group projects in INFO-529 (Bioinformatics Machine Learning)

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6. SolsexGenome SolsexGenome Public

   This is the scripts we used for performing the analyses in our research work on Solanum appediculatum genome and identification of sex determination region

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