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xia2 / screen19 Public

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New screen19 pipeline#61

Open

noemifrisina wants to merge 33 commits intomainxia2/screen19:mainfrom

new-screeningxia2/screen19:new-screeningCopy head branch name to clipboard

Conversation Commits33 (33)Checks Files changed

Open

New screen19 pipeline#61
noemifrisina wants to merge 33 commits intomainfrom
new-screening

Commits

Commits on Oct 26, 2022

Raze the old stuff
benjaminhwilliams
committed
Raze the old entry points
benjaminhwilliams
committed
Set up Azure Pipelines CI (maybe?)
benjaminhwilliams
committed
Set up basic scripts and tests
benjaminhwilliams
committed
Setuptools nonsense...
benjaminhwilliams
committed
More setuptools nonsense...
benjaminhwilliams
committed
Even more setuptools stuff ...
noemifrisina
committed
Get correct versioning from setup.cfg
noemifrisina
committed

Commits on Oct 31, 2022

update pre-commit to 3.8
noemifrisina
committed
Add missing bits for basic script to run. Exchange procrunner with subprocess
noemifrisina
committed
Correct logging levels
benjaminhwilliams
committed
Avoid pytest error with argparse
noemifrisina
committed
Remove the last tristan bits from packaging
noemifrisina
committed
Add requirements file
noemifrisina
committed
Correct logging levels, properly this time
benjaminhwilliams
committed

Commits on Nov 18, 2022

Add libtbx dispatcher
noemifrisina
committed

Commits on Nov 21, 2022

Get dials.import to work
noemifrisina
committed
Add basic find_spots and indexing
noemifrisina
committed
Fill in pipeline - TBC
noemifrisina
committed
Add version parser, and a slightly working show_config
noemifrisina
committed

Commits on Dec 9, 2022

Hopefully fix imports
noemifrisina
committed
Get correct scopes
noemifrisina
committed
Try different scope path
noemifrisina
committed
Ugly scope workaround
noemifrisina
committed
Update parser to accept also image range as input eg. file_00.cbf:0:10
noemifrisina
committed

Commits on Dec 12, 2022

Workaround for additional options in dials pipeline
noemifrisina
committed
Fix the names
noemifrisina
committed
Get minimum exposure to run - at least for integration
noemifrisina
committed
Add some HOWTO info
noemifrisina
committed
Get minimum exposure to work correctly for indexing
noemifrisina
committed
Parser workaround for minimum exposure
noemifrisina
committed

Commits on Dec 15, 2022

Tidy up help essage
noemifrisina
committed
Start setting up logging in screen script
noemifrisina
committed

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