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CardiacSeg

Reference Structure

anatomical_structure

(https://doi.org/10.3389/fcvm.2020.00025)

List of Paper

Timeline

Oct/30 Update:

  • Results of SAM2 on 4 datasets

  • Inspiration from MICCAI 2024 paper

  • Purpose of cardiac segmentation in clinical application; applicable medical scenario

Nov/6 and Nov/13 Update:

  • Literature Review on Shape Prior
    [Note]

  • Literature Review on Video Segmentation (How to tackle temporal information)
    [Note]

Nov/20 Update:

  • Detailed Notes for SAM2 architecture
    [Note]

  • TAU module for temporal
    [Note]

Dec/5 Update:

  • Research on 2D&3D encoder methods
    [Note]

  • Research Direction for optimizing storage occupancy
    [Note]


Weekly Group Meeting

To be explored

  • Design of loss function to add shape constraint in the training loop

  • LORA on fine tuning

  • Metric that measure accuracy for edges


Done

  • Literature Review on Shape Prior

    • Feasible method for shape prior for anatomically aware block
  • Literature Review on video segmentation

Experiments done

  • SAM2 on 2 datasets [Marcia]

  • Comparison Test for 2 datasets:

    • nnUNet [Arjun]

    • MedSAM2 [Arjun]

    • TransUNet

Experiment to be done

  • Comparision Test:

    • Deep Separable Spatiotemporal Learning for Fast Dynamic Cardiac MRI

    • Deep Conditional Shape Models for 3D Cardiac Segmentation

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