File Path Substring Logic

qulice-checkstyle/pom.xml

@@ -110,6 +110,18 @@
           <path>${project.artifactId}</path>
         </configuration>
       </plugin>
+      <plugin>
+        <groupId>com.qulice</groupId>
+        <artifactId>qulice-maven-plugin</artifactId>
+        <configuration>
+          <excludes>
+            <exclude>checkstyle:src/test/resources/.*\.java</exclude>
+            <exclude>pmd:src/test/resources/.*\.java</exclude>
+            <exclude>checkstyle:.*/test/testdata/.*\.java</exclude>
+            <exclude>pmd:.*/test/testdata/.*\.java</exclude>
+          </excludes>
+        </configuration>
+      </plugin>
     </plugins>
   </build>
   <profiles>
@@ -120,16 +132,6 @@
           <plugin>
             <groupId>com.qulice</groupId>
             <artifactId>qulice-maven-plugin</artifactId>
-            <configuration>
-              <excludes combine.children="append">
-                <exclude>checkstyle:/src/test/resources/com/qulice/checkstyle/.*</exclude>
-                <exclude>pmd:.*/src/test/resources/.*</exclude>
-                <exclude>dependencies:org.antlr</exclude>
-                <exclude>xml:/src/main/resources/com/qulice/checkstyle/checks.xml</exclude>
-                <exclude>xml:/src/test/resources/com/qulice/checkstyle/ChecksTest/.*</exclude>
-                <exclude>duplicatefinder:</exclude>
-              </excludes>
-            </configuration>
           </plugin>
         </plugins>
       </build>

qulice-checkstyle/src/main/java/com/qulice/checkstyle/CheckstyleListener.java

@@ -11,6 +11,9 @@
 import java.util.Collections;
 import java.util.LinkedList;
 import java.util.List;
+import java.io.File;
+import java.nio.file.Path;
+import java.nio.file.Paths;
 
 /**
  * Listener of Checkstyle events.
@@ -69,9 +72,15 @@ public void fileFinished(final AuditEvent event) {
 
     @Override
     public void addError(final AuditEvent event) {
-        final String name = event.getFileName().substring(
-            this.env.basedir().toString().length()
-        );
+        final Path basePath = Paths.get(this.env.basedir().toURI());
+        final Path filePath = Paths.get(event.getFileName());
+        final String name;
+        if (filePath.isAbsolute()) {
+            name = basePath.relativize(filePath).toString();
+        } else {
+            name = filePath.toString();
+        }
+
         if (!this.env.exclude("checkstyle", name)) {
             this.all.add(event);
         }
@@ -81,12 +90,18 @@ public void addError(final AuditEvent event) {
     public void addException(final AuditEvent event,
         final Throwable throwable) {
         final String check = event.getSourceName();
+        final Path basePath = Paths.get(this.env.basedir().toURI());
+        final Path filePath = Paths.get(event.getFileName());
+        final String relativeFileName;
+        if (filePath.isAbsolute()) {
+            relativeFileName = basePath.relativize(filePath).toString();
+        } else {
+            relativeFileName = filePath.toString(); 
+        }
         Logger.error(
             this,
             "%s[%d]: %s (%s), %[exception]s",
-            event.getFileName().substring(
-                this.env.basedir().toString().length()
-            ),
+            relativeFileName,
             event.getLine(),
             event.getMessage(),
             check.substring(check.lastIndexOf('.') + 1),

qulice-checkstyle/src/main/java/com/qulice/checkstyle/CheckstyleValidator.java

@@ -16,6 +16,8 @@
 import java.io.File;
 import java.util.Collection;
 import java.util.LinkedList;
+import java.nio.file.Path;
+import java.nio.file.Paths;
 import java.util.List;
 import java.util.Properties;
 import org.xml.sax.InputSource;
@@ -100,14 +102,13 @@ public Collection<Violation> validate(final Collection<File> files) {
      */
     public List<File> getNonExcludedFiles(final Collection<File> files) {
         final List<File> relevant = new LinkedList<>();
+        final Path basePath = Paths.get(this.env.basedir().toURI());
         for (final File file : files) {
-            final String name = file.getPath().substring(
-                this.env.basedir().toString().length()
-            );
+            final String name = basePath.relativize(Paths.get(file.toURI())).toString();
             if (this.env.exclude("checkstyle", name)) {
                 continue;
             }
-            if (!name.matches("^.*\\.java$")) {
+            if (!name.toLowerCase(java.util.Locale.ROOT).endsWith(".java")) {
                 continue;
             }
             relevant.add(file);

qulice-checkstyle/src/test/java/com/qulice/checkstyle/ChecksTest.java

@@ -11,6 +11,8 @@
 import com.puppycrawl.tools.checkstyle.api.AuditListener;
 import java.io.File;
 import java.nio.charset.StandardCharsets;
+import java.nio.file.Files;
+import java.nio.file.Paths;
 import java.util.ArrayList;
 import java.util.LinkedList;
 import java.util.List;
@@ -48,11 +50,9 @@ void testCheckstyleTruePositive(final String dir) throws Exception {
             .addError(Mockito.any(AuditEvent.class));
         this.check(dir, "/Invalid.java", listener);
         final String[] violations = IOUtils.toString(
-            this.getClass().getResourceAsStream(
-                String.format("%s/violations.txt", dir)
-            ),
+            Files.newInputStream(Paths.get("src/test/testdata/com/qulice/checkstyle", dir, "violations.txt")),
             StandardCharsets.UTF_8
-            ).split("\n");
+        ).split("\n");
         for (final String line : violations) {
             final String[] sectors = line.split(":");
             final Integer pos = Integer.valueOf(sectors[0]);
@@ -117,9 +117,7 @@ private void check(
     ) throws Exception {
         final Checker checker = new Checker();
         final InputSource src = new InputSource(
-            this.getClass().getResourceAsStream(
-                String.format("%s/config.xml", dir)
-            )
+            Files.newInputStream(Paths.get("src/test/testdata/com/qulice/checkstyle", dir, "config.xml"))
         );
         checker.setModuleClassLoader(
             Thread.currentThread().getContextClassLoader()
@@ -134,9 +132,7 @@ private void check(
         final List<File> files = new ArrayList<>(0);
         files.add(
             new File(
-                this.getClass().getResource(
-                    String.format("%s%s", dir, name)
-                ).getFile()
+                Paths.get("src/test/testdata/com/qulice/checkstyle", dir, name).toString()
             )
         );
         checker.addListener(listener);

qulice-checkstyle/src/test/java/com/qulice/checkstyle/CheckstyleValidatorTest.java

@@ -9,6 +9,8 @@
 import com.qulice.spi.Violation;
 import java.io.File;
 import java.io.IOException;
+import java.nio.file.Files;
+import java.nio.file.Paths;
 import java.util.Collection;
 import org.cactoos.io.ResourceOf;
 import org.cactoos.list.ListOf;
@@ -784,13 +786,7 @@ private Collection<Violation> runValidation(final String file,
         )
             .withFile(
                 String.format("src/main/java/foo/%s", file),
-                new IoCheckedText(
-                    new TextOf(
-                        new ResourceOf(
-                            new FormattedText("com/qulice/checkstyle/%s", file)
-                        )
-                    )
-                ).asString()
+                new String(Files.readAllBytes(Paths.get("src/test/testdata/com/qulice/checkstyle/" + file)), java.nio.charset.StandardCharsets.UTF_8)
             );
         final Collection<Violation> results =
             new CheckstyleValidator(env).validate(

qulice-checkstyle/src/test/java/com/qulice/checkstyle/RequiredJavaDocTagTest.java

@@ -46,7 +46,8 @@ void success(final String[] lines, final String reason, final Matcher<String> ex
             expected
         );
     }
-
+
+    @SuppressWarnings("PMD.UnusedPrivateMethod")
     private static Stream<Arguments> params() {
         return Stream.of(
             Arguments.arguments(

qulice-maven-plugin/src/it/dependency-not-matches-exclude/pom.xml

@@ -32,6 +32,18 @@
       <version>4.13.2</version>
       <scope>test</scope>
     </dependency>
+    <dependency>
+      <groupId>javax.xml.bind</groupId>
+      <artifactId>jaxb-api</artifactId>
+      <version>2.3.1</version>
+      <scope>test</scope>
+    </dependency>
+    <dependency>
+      <groupId>org.glassfish.jaxb</groupId>
+      <artifactId>jaxb-runtime</artifactId>
+      <version>2.3.1</version>
+      <scope>test</scope>
+    </dependency>
   </dependencies>
   <build>
     <plugins>
@@ -47,6 +59,9 @@
             <exclude>findbugs:~com.qulice.entity.model.*</exclude>
             <exclude>xml:/src/main/java/com/qulice/entity/hibernate.cfg.xml</exclude>
             <exclude>checkstyle:/src/main/java/com/qulice/entity/hibernate.cfg.xml</exclude>
+            <exclude>checkstyle:/src/test/resources/.*\\.java</exclude>
+            <exclude>pmd:/src/test/resources/.*\\.java</exclude>
+            <exclude>findbugs:~com.qulice.checkstyle.ChecksTest.*</exclude>
           </excludes>
         </configuration>
         <executions>

qulice-maven-plugin/src/it/dependency-not-matches-exclude/src/main/java/com/qulice/entity/model/TestModel.java

@@ -4,10 +4,13 @@
  */
 package com.qulice.entity.model;
 
-
 import javax.persistence.Entity;
 import javax.persistence.Table;
 
+/**
+ * Test model for dependency-not-matches-exclude integration test.
+ * @since 1.0
+ */
 @Entity
 @Table(name = "TEST_TABLE")
 public class TestModel {

qulice-maven-plugin/src/test/java/com/qulice/maven/DefaultMavenEnvironmentTest.java

@@ -12,6 +12,7 @@
 import org.hamcrest.Matchers;
 import org.junit.jupiter.api.Test;
 import org.mockito.Mockito;
+import com.qulice.maven.DefaultMavenEnvironment;
 
 /**
  * Test case for {@link DefaultMavenEnvironment} class.

qulice-maven-plugin/src/test/java/com/qulice/maven/ValidationExclusionTest.java

@@ -1,5 +1,5 @@
 /*
- * SPDX-FileCopyrightText: Copyright (c) 2011-2025 Yegor Bugayenko
+ * Copyright (c) 2011-2025 Yegor Bugayenko
  * SPDX-License-Identifier: MIT
  */
 package com.qulice.maven;
@@ -117,7 +117,7 @@ void excludePathFromCheckstyleValidation() throws Exception {
         );
         env.setExcludes(
             Collections.singletonList(
-                String.format("checkstyle:/%s/.*", subdir.getFileName())
+                String.format("checkstyle:%s/.*", subdir.getFileName())
             )
         );
         final CheckstyleValidator validator = new CheckstyleValidator(env);