scitex.ai | pip install scitex
(Demo) Automated Research with SciTeX MCP Server in 40 min. Literature Search → Analysis → Graphing → Manuscript → Revision Letter
| Component | Description | Repository |
|---|---|---|
| SciTeX-Python | Modular Python toolkit for scientific research with 200+ MCP tools | scitex-python |
| SciTeX-Engine | Emacs interface for Claude Code with auto-response, vterm integration, and session management | emacs-claude-code |
| SciTeX-Cloud | Django-based, self-hostable browser application for scientific research | scitex-cloud |
Downstream, Standalone Packages
Standalone packages usable independently or via unified scitex interface.
| Package | scitex Module | Description |
|---|---|---|
| figrecipe | scitex.plt |
Reproducible, publication-ready scientific figures with mm-precision layouts and 47 plot types |
| scitex-stats | scitex.stats |
Publication-ready statistical testing with 23 tests, effect sizes, and power analysis |
| scitex-io | scitex.io |
Universal scientific data I/O with plugin registry (30+ formats) |
| scitex-writer | scitex.writer |
LaTeX manuscript compilation with automatic versioning and diff generation |
| scitex-scholar | scitex.scholar |
Scientific literature search and analysis |
| crossref-local | scitex.scholar.crossref |
Local CrossRef database with 167M+ papers and full-text search |
| openalex-local | scitex.scholar.openalex |
Local OpenAlex database with 284M+ papers and semantic search |
| scitex-dataset | scitex.dataset |
Unified API for neuroscience datasets (OpenNeuro, DANDI, PhysioNet) |
| scitex-clew | scitex.clew |
Verifiable knowledge graph for scientific experiments |
| scitex-linter | scitex.linter |
AST-based linter enforcing reproducible research patterns |
| scitex-audio | scitex.audio |
Text-to-Speech with multiple backend fallback |
| socialia | scitex.social |
Unified social media management |
| scitex-container | scitex.container |
Unified container management for Apptainer and Docker |
| scitex-tunnel | scitex.tunnel |
Persistent SSH reverse tunnel for NAT traversal |
| scitex-dev | scitex.dev |
Shared developer utilities for the SciTeX ecosystem |
| scitex-app | scitex.app |
Write-once interface for local + cloud apps |
| Title | Code |
|---|---|
| A deep learning model for the detection of various dementia and MCI pathologies based on resting-state electroencephalography data | eeg-dementia-classification |
| Towards threshold invariance in defining hippocampal ripples | Code, pip |
| Hippocampal neural fluctuations during working memory | ripple-wm-code |
| gPAC: GPU-accelerated phase-amplitude coupling analysis (341x faster than TensorPAC) | gPAC |
| Intestelligence: A pharmacological neural network using intestine data | intestelligence |
| Category | Package | Description |
|---|---|---|
| AI | emacs-claude-code | Claude Code integration (SciTeX-Engine) |
| emacs-llm | LLM chat client in Elisp | |
| genai | LLM chat interface with streaming and conversation history | |
| emacs-whisper-live | Real-time speech transcription with Whisper | |
| emacs-mcp-server | MCP server for Emacs | |
| Dev | elisp-test | Testing framework for Elisp |
| elisp-linter | Linter for Elisp | |
| emacs-python-import-manager | Python import management | |
| emacs-python-config | Python environment configuration | |
| UI | emacs-tab-manager | Tab management |
| emacs-buffer-navigation | Buffer navigation | |
| emacs-recentf-project | Project-aware recent files | |
| emacs-spinner | Spinner animations | |
| Tools | emacs-header-footer-manager | Header/footer management |
| emacs-slack | Slack integration | |
| emacs-message | Toggle print/message | |
| emacs-gif-screencast | GIF screencast & capture | |
| emacs-password-manager | GPG-encrypted password manager |
| Resource | Description |
|---|---|
| agents | Sync MCP servers, skills, and instructions across AI coding tools |
| automated-research-demo | Demo: AI-driven autonomous research from data to manuscript |
| .dotfiles-public | Linux configuration |
| ai-ielts.app | IELTS speaking/writing practice |
| Programming advice (EN) / (JA) | Tips for younger self |
ywatanabe@scitex.ai