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Include model entity IDs in ExpData / ReturnData

enhancement

Status: Open.

#3107 In AMICI-dev/AMICI;

· dweindl opened on Dec 12, 2025

Refactor <code>ExpData</code>

breaking changeIssue changes API in backwards-incompatible wayIssue changes API in backwards-incompatible way

Status: Open.

#3106 In AMICI-dev/AMICI;

· dweindl opened on Dec 12, 2025

·  

v2.0.0

ODEExporter: use get_model_dir if <code>outdir</code> is None

Status: Open.

#3100 In AMICI-dev/AMICI;

· dweindl opened on Dec 11, 2025

AMICI segfault on macOS ARM (M2 Chip)

conda

Status: Open.

#3088 In AMICI-dev/AMICI;

· NantiaL opened on Dec 9, 2025

Add example for log filtering

documentation

enhancement

Status: Open.

#3081 In AMICI-dev/AMICI;

· dweindl opened on Dec 2, 2025

Check flaky test_benchmark_gradient / Weber_BMC2015

ci

Status: Open.

#3078 In AMICI-dev/AMICI;

· dweindl opened on Nov 27, 2025

Extend support for PEtab v2 / PySB

PEtabPEtab-import relatedPEtab-import related

PySBPySB import relatedPySB import related

Status: Open.

#3068 In AMICI-dev/AMICI;

· dweindl opened on Nov 20, 2025

Rearrange <code>python/</code>

Status: Open.

#3061 In AMICI-dev/AMICI;

· dweindl opened on Nov 20, 2025

·  

v1.0.0 remove matlab code

Handle constant state variables in check for static trigger functions

enhancement

performance

Status: Open.

#3055 In AMICI-dev/AMICI;

· dweindl opened on Nov 18, 2025

Check for changes in generated model code for test models

ci

Status: Open.

#3050 In AMICI-dev/AMICI;

· dweindl opened on Nov 17, 2025

Move simulation code to subpackage

refactoring

Status: Open.

#3041 In AMICI-dev/AMICI;

· dweindl opened on Nov 15, 2025

·  

v1.0.0 remove matlab code

amici._get_commit_hash does not work with git worktree

Status: Open.

#3034 In AMICI-dev/AMICI;

· dweindl opened on Nov 14, 2025