What's Changed
- Update AMReX for SyCL bug fix by @jrood-nrel in #605
- Specify clang-tidy config file location by @jrood-nrel in #606
- Update PelePhysics and AMReX by @jrood-nrel in #609
- Landon/add spray post func by @ldowen in #615
- Update amrex-hydro by @marchdf in #619
- Update PelePhysics and AMReX by @jrood-nrel in #612
- Rogue omp pragma near new ParallelFor by @baperry2 in #620
- Add runtime Diagnostics added to PelePhysics by @esclapez in #616
- Add a 'coordinate' derived var. by @esclapez in #623
- Simplify spray data by @ldowen in #629
- Simplify move transport to ec by @marchdf in #632
- Simplify diffusion flux calls by removing need for sparse EB struct by @marchdf in #631
- Fix some postprocessing by @marchdf in #635
- Skip covered cells for transport coeff calc by @marchdf in #637
- Add documentation of flag for EB checkpoint reading by @marchdf in #639
- Make tangential velocity weights const on gpu instead of thread private by @marchdf in #640
- Update PelePhysics by @baperry2 in #630
- Plt restart bug by @baperry2 in #645
- Reorganize MOL file by @marchdf in #636
- Add cavity flame case by @jrood-nrel in #649
- Fix flux factor multiplication by @marchdf in #650
- Redistribution move by @baperry2 in #647
- Fix the if condition on the fillpatcher reset by @marchdf in #651
- Fix static diag vector memory leak by @marchdf in #652
- Remove sort in init EB and increase parallelism by @marchdf in #644
- Update Intel OneAPI CI by @jrood-nrel in #653
- Update PeleMP submodule by @ldowen in #646
- Update PelePhysics to fix SUNDIALS directory detection by @jrood-nrel in #654
- Try to use older version of cppcheck by @jrood-nrel in #655
- Consolidate flux register calculation into one place by @marchdf in #657
- Consolidate into a post redist function by @marchdf in #658
- Reorg some hydro routines by @marchdf in #660
- add BC checks in Godunov cmpflx by @baperry2 in #662
- Remove track grid loses by @marchdf in #661
- Add ccache stuff by @jrood-nrel in #659
- Clang tidy fixes by @marchdf in #667
- Add in some more infrastructure for EB godunov by @marchdf in #663
- Add Re-redistribution by @marchdf in #664
- Test ccache by @jrood-nrel in #666
- Try using managed memory for fcompare by @jrood-nrel in #669
- Change bcnormal interface to allow for better reflections at walls by @baperry2 in #665
- Add plm iorder flag back to PLM by @marchdf in #668
- Revert "Try using managed memory for fcompare" by @jrood-nrel in #670
- Update docs and remove fortran references and code by @marchdf in #672
- Introduce mol_iorder flag by @marchdf in #671
- Fix MassCons nightly test by @baperry2 in #674
- Add pipefail to CI. Update AMReX. by @jrood-nrel in #675
- Suppress lto-wrapper warning in CI by @jrood-nrel in #676
- Reduce order at user BCs for Godunov by @baperry2 in #673
- Fix datlog and update amrex by @marchdf in #677
- Update tags with the use of iv and pass in ebflag by @marchdf in #678
- Revert amrex update by @marchdf in #681
- Fix reflux factor for MOL by @marchdf in #679
- Make the tagging aware of EBs by @marchdf in #682
- Update gitignore by @marchdf in #683
- Fix re-redistribution by @marchdf in #680
- Use sundials submodule for make TPL by @jrood-nrel in #686
- Isothermal domain bc by @baperry2 in #684
- Update citations by @marchdf in #687
- Update submods by @marchdf in #688
- Update AMReX and PelePhysics by @jrood-nrel in #690
- Increase ghost cells for the level mask by @marchdf in #691
- Update submodules by @jrood-nrel in #693
- Bump setup python version by @marchdf in #694
- Add dependatbot by @marchdf in #695
- Change default to not use slopes in SRD for robustness by @baperry2 in #698
- Add codespell by @marchdf in #697
- Check for warnings in mechanisms by @jrood-nrel in #696
- Reproducibility for EB covered state by @baperry2 in #702
- Add ccache to clang-tidy by @jrood-nrel in #701
- Add isooctane_lu inputs for PMF case by @jrood-nrel in #705
- Fix derive for state variables with ghost cells by @baperry2 in #707
- Some improvements and testing for the EB covered state by @baperry2 in #704
- remove plt vars with nans from eb-c3 by @baperry2 in #708
- remove dependence of Filter on Utilities by @baperry2 in #710
- Add some PeleC options to the GNUmakefiles by @jrood-nrel in #709
- Regex clang tidy by @baperry2 in #711
- Remove filter files that will now live in PelePhysics by @baperry2 in #714
- remove google test entry in .gitmodules file by @baperry2 in #716
- Allow manual dispatch of CI workflow by @baperry2 in #720
- Update pelephysics submodule by @marchdf in #715
- Fix warnings in pelephysics by @marchdf in #723
- Don't do FPE checking on MacOS by @jrood-nrel in #727
- abort on unused parmparse variables in input file in tests by @baperry2 in #725
- Add PeleMP cases for soot and spray by @marchdf in #724
- Update github cache cleanup by @jrood-nrel in #728
- Try using macos for more RAM when running clang-tidy by @jrood-nrel in #729
- Remove prob parm passing in spray by @marchdf in #730
- Bump Submodules/PelePhysics from
b7d592fto87f9706by @dependabot in #734 - MD's xmas present: EB Godunov by @marchdf in #731
- Bump Submodules/PelePhysics from
87f9706to771ab82by @dependabot in #740 - Minor tweak to EB-C7 by @marchdf in #742
- initialize diagnostics on restart by @baperry2 in #748
- Bump Submodules/PelePhysics from
771ab82toe3f2077by @dependabot in #750 - Fix Wunreachable-code by @marchdf in #757
- Fix BC Types due to breaking AMReX change by @baperry2 in #758
- Bump Submodules/PelePhysics from
c125141toc2d6577by @dependabot in #761 - Bump Submodules/PelePhysics from
c2d6577to71fdec3by @dependabot in #765 - Add citation by @marchdf in #766
- Fix the doi url by @marchdf in #767
- Better Problem Specific Function capability by @baperry2 in #743
- Bump Submodules/PelePhysics from
71fdec3to50b990bby @dependabot in #770 - Add STL geom_type for EB in Source/InitEB.cpp by @ejyoo921 in #771
- Bump Submodules/PelePhysics from
50b990btodeee71eby @dependabot in #775 - Update dev model by @marchdf in #776
- Update pelephysics by @marchdf in #779
- Implement the state prescription at EB for the Riemann solver by @marchdf in #774
- Bump Submodules/PelePhysics from
c0f30b9to6c1a06eby @dependabot in #786 - GH action deprecation fix by @marchdf in #792
- Bump Submodules/PelePhysics from
6c1a06eto5f197f2by @dependabot in #791 - Run TGReact test by @baperry2 in #793
- Bump Submodules/PelePhysics from
5f197f2to1bea1bfby @dependabot in #795 - Bump Submodules/PelePhysics from
1bea1bftoe4621c5by @dependabot in #804 - Fix codespell by @marchdf in #806
- Update PelePhysics by @jrood-nrel in #807
- Remove unused OMP variables by @marchdf in #811
- fix interpolation in PMF cases by @baperry2 in #808
- Modifications for PelePhysics PeleParams stuff by @baperry2 in #812
- Bump Submodules/PelePhysics from
b17d6b7to19ccf85by @dependabot in #813 - remove HIT generation script, now lives in PelePhysics by @baperry2 in #817
- Additional SGS Models by @JhonCordova in #802
- use template to simplify a bunch of derive functions by @baperry2 in #819
- update pp to get updated amrex for kestrel by @baperry2 in #820
- Shallow clone the submodules by @marchdf in #821
- Update pelephysics by @marchdf in #822
- eb-converging-nozzle: turn on diffusion so sponge layers work by @baperry2 in #826
- Change CDash project name by @jrood-nrel in #828
- Enable CTest earlier by @jrood-nrel in #829
- EB-FlowOverCylinder Case by @dmontgomeryNREL in #827
- Update some paths for test files by @jrood-nrel in #832
- Update PelePhysics by @baperry2 in #831
- Fix dm_as_fine for EB Godunov by @marchdf in #833
- Run PLM Re-Re test by @baperry2 in #834
- Bump Submodules/PelePhysics from
48fac13tofe882f0by @dependabot in #840 - update clang format action version to avoid distutils issue by @baperry2 in #841
- Remove advection from auxiliary quantities B_k by @dmontgomeryNREL in #839
- Bump Submodules/PelePhysics from
fe882f0to1e7eb65by @dependabot in #842 - Fix bug in LES coefficient calculation. by @marchdf in #846
- Fix bug in SFS calculation of dynamic Smagorinsky by @marchdf in #849
- Add report for documentation warnings by @jrood-nrel in #851
- Bump Submodules/PelePhysics from
060a7aetob703644by @dependabot in #852 - Some fixes for warnings in 2D by @baperry2 in #855
- Update clang-tidy by @marchdf in #856
- rotating reference frames capability by @hsitaram in #850
- fix 'paraview' spelling in the readme file by @pa-one55 in #864
- pin intel-oneapi version in CI by @baperry2 in #866
- Bump Submodules/PelePhysics from
5761481to327aadbby @dependabot in #870 - Fix some python functionality by @marchdf in #871
- Bump Submodules/PelePhysics from
327aadbtof54b084by @dependabot in #873 - Bump Submodules/PelePhysics from
f54b084to9625a85by @dependabot in #878 - Bump Submodules/PelePhysics from
9625a85to760e2feby @dependabot in #880 - Update CI to ubuntu-24.04 by @jrood-nrel in #869
- Try to update docs deploy action by @jrood-nrel in #881
- Try to fix docs deployment by @jrood-nrel in #883
- Commit to check that the docs deploy by @jrood-nrel in #884
- Check that docs deploy by @jrood-nrel in #885
- Check that docs deploy by @jrood-nrel in #886
- Bump Submodules/PelePhysics from
760e2fetob462d64by @dependabot in #890 - add link to Pele pubs page in README by @baperry2 in #893
- Bump Submodules/PelePhysics from
b462d64to88b9f99by @dependabot in #892 - Bump Submodules/PelePhysics from
88b9f99to652a64fby @dependabot in #896 - Fix bug in indexing for EB-inflow hyperbolics by @baperry2 in #895
- Bump Submodules/PelePhysics from
652a64ftoeedcf0bby @dependabot in #897 - Bump Submodules/PelePhysics from
eedcf0bto4e9548eby @dependabot in #906 - Use ubuntu 24 in all CI by @jrood-nrel in #907
- Fix some warnings by @baperry2 in #915
- Bump Submodules/PelePhysics from
4e9548eto8b942d4by @dependabot in #914 - correct soot zerod plotting by @baperry2 in #916
- CI Updates - Include reference comparison by @baperry2 in #917
- Update PelePhysics to 25.04 by @baperry2 in #930
New Contributors
- @dependabot made their first contribution in #734
- @ejyoo921 made their first contribution in #771
- @JhonCordova made their first contribution in #802
- @dmontgomeryNREL made their first contribution in #827
- @pa-one55 made their first contribution in #864
Full Changelog: v23.03...v25.04
Contributors
hsitaram, esclapez, and 9 other contributors