Discussions

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  General advice on registering a smaller piece of tissue to a complete atlas.

  sulli419 started Feb 11, 2026 in General

  

  

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  Optimizing SyN registration of one binary mask to another

  sulli419 started Nov 13, 2025 in General

  

  

  

  

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  4D image bias field correction for quantitative MRI

  nolog2025 asked Feb 7, 2026 in Q&A · Unanswered

  

  

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  Mitigating Jacobian overestimation in SyN for near-zero brain volume change

  ChristineFarrugia asked Jan 9, 2026 in Q&A · Unanswered

  

  

  

  

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  Best practice for ordering T1w preprocessing steps (Denoise, N4, lesion filling)

  ChristineFarrugia asked Dec 15, 2025 in Q&A · Answered

  

  

  

  

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  Internet cut out during template construction (using a cluster) - can I get it to pick up from where it left off?

  ThomasMurrayPhD asked Dec 10, 2025 in Q&A · Unanswered

  

  

  

  

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  Is this the correct order for antsApplyTransforms (Warp then Affine)?

  cxstevenddd started Dec 7, 2025 in General

  

  

  

  

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  ANTs SyN Normalization with Brain Tumor Lesions: Patient-to-MNI (Moving Mask) vs. MNI-to-Patient (Fixed Mask)?

  cxstevenddd asked Dec 5, 2025 in Q&A · Unanswered

  

  

  

  

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  multi-label segmented registration

  mdbudde started Nov 21, 2025 in General

  

  

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  Converting Elastix (other) transform for use in ANTs

  sulli419 started Nov 20, 2025 in General

  

  

  

  

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  correction matrices from ants.motion_correction (antspy)

  garincle started Nov 4, 2025 in General

  

  

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  2.6.3 Liometopum

  cookpa announced Oct 8, 2025 in Announcements

  

  

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  time series apply transform

  leoyala asked Sep 23, 2025 in Q&A · Answered

  

  

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  blurry multimodal template output with antsMultivariateTemplateConstruction2

  gjoue asked Jul 11, 2025 in Q&A · Unanswered

  

  

  

  

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  Dealing with missing data in antsMultivariateTemplateConstruction2

  cauzzo-s5 started Jul 23, 2025 in General

  

  

  

  

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  intra-subject alignment in antsMultivariateTemplateConstruction2

  cauzzo-s5 started Jul 21, 2025 in General

  

  

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  2.6.1 Leptomyrmula - Jacobian and tensor fixes, upgrade recommended

  cookpa announced May 30, 2025 in Announcements

  

  

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  advantages of a multivariate group template for ROI segmentation?

  gjoue asked May 12, 2025 in Q&A · Unanswered

  

  

  

  

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  c3d question

  nadluru asked May 18, 2025 in Q&A · Unanswered

  

  

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  missing output files antsMultivariateTemplateConstruction2 + rerunning/what was included in template0.nii?

  gjoue asked May 7, 2025 in Q&A · Answered

  

  

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  group template construction with unbalanced group sizes with antsMultivariateTemplateConstruction2

  gjoue asked May 7, 2025 in Q&A · Unanswered

  

  

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  Tensor reorientation bug fixed in #1871

  cookpa announced May 5, 2025 in Announcements

  

  

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  For Mac users: proposal to end Intel Mac support in ITK

  cookpa started Apr 28, 2025 in Polls

  

  

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  Ktunaxia

  cookpa announced Apr 7, 2025 in Announcements

  

  

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  Trouble executing N4ITK binaries compiled under MacOS 15.1

  davidmummy started Feb 6, 2025 in General

  

  

  

  

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