Rc/1.0.0 #85
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Rc/1.0.0 #85
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Update manifest.py Update compare manifest. Update Cache objects. Update tests.
Working spatial notebooks. Successful runs with 20250630 data packaging.
Slight text modification spatial notebook.
Wrap up initial draft of spatial notebooks. Initial web assets. Spatial notebook clean up. Add links between notebooks to end. Remove empty cell at end of notebooks. Add spatial webpage
Fix typo Add plotting of individual slab/selection functionality. Clean up notebook and webpages. Modify how expression data is plotted for HMBA-BG. Colorbars on expression data. Remove mouse from spatial. Various fixes. Add zero expression and other species to legend. Running notebooks with requested updates. Clean up text in notebooks. Update toc and add supplemental metadata description page. Add comment that qc_pass is in cell_metadata.
CPT and raw expression. Add extra sorting to manifest_builder.
Update file locations.
Modify changelog. Clean up HMBA-BG release links. Update Human spatial gene list.
Rerun of notebooks.
this can reduce the memory footprint by a factor of many (scanning through the full WHB 10X data, I was able to get a process that used to require >= 50 GB to use only 10 GB)
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