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LTR repeat glyph example #4902

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LTR repeat glyph example #4902

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cmdcolin
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@cmdcolin cmdcolin commented Mar 17, 2025

You can get some of the way towards this by using just the existing glyph rendering system e.g. just manipulating color1, but there are weaknesses

  1. There is a "repeat_region" element that is full length of feature
  2. There is a "Copia_ltr_retrotransposon" (for example) that is a child of repeat_region, that is ALSO the full length of feature
  3. Then there are other elements, that are also child of repeat_region

By making a specialized repeat glyph, we can render it a bit better, particularly the fact of of (2) not needing to be e.g. a transparent feature

This is a demo quality PR, but could be improved potentially

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Example screenshot

image

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