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@mkitti mkitti commented Sep 30, 2025

Additionally:

  • Have scripts access ShroffCelegansModels.jl dependencies through ShroffCelegansModels.
  • :dash linestyle does not seem to work in WGLMakie at the moment
┌ Warning: Error in Javascript: THREE.WebGLProgram: Shader Error No error - VALIDATE_STATUS false                                                                                       
│                                                                                                                                                                                       
│ Program Info Log:                                                                                                                                                                     
│ error: declarations for uniform `_uuniform_pattern` have mismatching precision qualifiers                                                                                             
│                                                                                                                                                                                       
│                                                                                                                                                                                       
│                                                                                                                                                                                       
│                                                                                                                                                                                       
│ Fragment log:                                                                                                                                                                         
│ Vertex log:                                                                                                                                                                           
│                                                                                                                                                                                       
│ )                                                                                                                                                                                     
└ @ Bonito ~/.julia/packages/Bonito/j7uJq/src/serialization/protocol.jl:41                                                                                                              
An exception was thrown in JS: Error: WebGL error: Invalid operation                                                                                                                    
Additional message: error initializing scene                                                                                                                                            
Stack trace:
    Error: WebGL error: Invalid operation
        at eval (eval at <anonymous> (https://shroff-data.int.janelia.org/fix_annotation_ap_axis/assets/035c131b8eccc08f3cda4053e1ad7d59ad39836d-Bonito.bundled.js?48ef2248e493856810fbfc4159c00cceacdb52aa:3494:27), <anonymous>:19:23)
        at Object.flush (https://shroff-data.int.janelia.org/fix_annotation_ap_axis/assets/cfaeeb082a89e41751d0699070f4b0f5074da5f6-WGLMakie.bundled.js?9b1c640ca86b589a1f70ae8d8ad00f697957fb96:24584:13)
        at Object.insert (https://shroff-data.int.janelia.org/fix_annotation_ap_axis/assets/cfaeeb082a89e41751d0699070f4b0f5074da5f6-WGLMakie.bundled.js?9b1c640ca86b589a1f70ae8d8ad00f697957fb96:24579:14)
        at Module.execute_in_order (https://shroff-data.int.janelia.org/fix_annotation_ap_axis/assets/cfaeeb082a89e41751d0699070f4b0f5074da5f6-WGLMakie.bundled.js?9b1c640ca86b589a1f70ae8d8ad00f697957fb96:24594:21)
        at eval (eval at <anonymous> (https://shroff-data.int.janelia.org/fix_annotation_ap_axis/assets/035c131b8eccc08f3cda4053e1ad7d59ad39836d-Bonito.bundled.js?48ef2248e493856810fbfc4159c00cceacdb52aa:3494:27), <anonymous>:4:9)

@mkitti mkitti requested a review from bjarthur October 9, 2025 14:29
- '1'
- '1.10'
- '1.11'
- '1.12'
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i usually just test on 1 and 1.10

using Statistics: Statistics
using StatsBase: StatsBase
using ThinPlateSplines: ThinPlateSplines
using TiffImages: TiffImages
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namespace decluttering like the above can be automated with https://github.com/JuliaTesting/ExplicitImports.jl

twisted_mesh_plot.visible = false
on(contour_mesh_toggle.active) do v
twisted_mesh_plot.visible = v
end
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consider setting twisted_mesh_plot.visible to contour_mesh_toggle.active when the former is created. like this: https://github.com/JaneliaSciComp/Transcriptome4D/blob/main/src/view-viewer.jl#L111-L112

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mkitti commented Nov 13, 2025

@dchen116 I just updated the web_makie_0_24 branch with all of the https://shroff-data.int.janelia.org/ apps working.

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3 participants