v1.14.0

What's Changed

• Alternative xarray approach to computing convservation time series by @xylar in #1080
• Separate dependencies in pyproject.toml by @altheaden in #1081
• Add support for custom climatology maps by @xylar in #1064
• Fix conservation when list of inputs is empty by @xylar in #1084
• Check that all BSF projections are present by @xylar in #1079
• Set under/over indices for sea ice conc and thickness by @xylar in #1083
• Update to mpas tools 1.0.0 and pyremap 2.0.0 by @xylar in #1085
• Fix hangs in ocean conservation by @xylar in #1086
• Switch to using barotropic streamfunction from mpas_tools by @xylar in #1074
• Reserve all processes for BSF calculation by @xylar in #1087
• Expand variables for polar regions conservation and mass fluxes by @xylar in #1089
• Switch CI from miniconda to micromamba by @altheaden in #1091
• Add netcdf support to geojson transects by @xylar in #1092
• Transpose transect obs dims to match model dims by @xylar in #1093
• Fix custom climatology maps by @xylar in #1097
• Switch from pkg_resources to importlib.resources by @xylar in #1096
• Add anomaly tag to timeSeriesOceanRegions by @xylar in #1090
• Update to mpas_tools >=1.2.2 by @xylar in #1100
• Version dropdown by @altheaden in #1095
• Remap 2D and 3D custom climatologies with same subtask by @xylar in #1099
• Add task for plotting maps of wind stress curl by @xylar in #1102
• Flesh out the developer's guide by @xylar in #1103
• Update the releasing documentation by @xylar in #1104
• Fix release notes by @xylar in #1105
• Fix docs for release candidates by @xylar in #1106
• Add @andrewdnolan to dependabot reviewers by @altheaden in #1108
• Update to mpas_tools >=1.3.0 by @xylar in #1111
• Switch from restart file to mesh file in all tasks by @xylar in #1109
• Remove icebergFreshWaterFlux from test suite by @xylar in #1113
• Drop python 3.9 and clean up by @xylar in #1115
• Switch from MpasConfigParser to tranche config parser by @xylar in #1116
• Time series edits by @irenavankova in #1112
• Remove @altheaden from reviewer lists by @altheaden in #1117
• Update unified suite to use python 3.13 by @xylar in #1118
• Update to v1.14.0 by @xylar in #1119
• Merge develop into main for v1.14.0 release by @xylar in #1120

Full Changelog: 1.13.0...1.14.0

v1.13.0

What's Changed

• Switch from WOA18 to WOA23 by @xylar in #1032
• Add a task that plots WOA23 transects by @xylar in #1033
• Fix land ice frazil in ocean conservation task by @cbegeman in #1031
• Remove the comparison grid name from sea ice gallery groups by @xylar in #1035
• Disable WOA23 transects by default by @xylar in #1038
• Antarctic transects by @irenavankova in #1037
• Rename Greenland Regions --> ISMIP6 Greenland Regions by @xylar in #1039
• Fix division by zero in 1d interpolation by @xylar in #1040
• Add python 3.13 by @altheaden in #1041
• Add OHC anomaly to timeSeriesOceanRegions by @xylar in #1034
• Additional MPAS-seaice plots for snow analyses by @eclare108213 in #1036
• Migrate setup procedures to pyproject.toml by @altheaden in #1044
• Cleanup and minor CI bug fixes by @altheaden in #1045
• Several fixes to the docs by @xylar in #1042
• More fixes following move to pyproject.toml by @xylar in #1047
• Relax upper bound on ESMF by @xylar in #1048
• Use separate conda cache directories in CI by @altheaden in #1049
• Fix barotropic streamfuncion by @xylar in #1050
• Add osnap T S climtransects by @alicebarthel in #899
• Fix several errors in the docs by @xylar in #1054
• A few fixes to climatology maps of velocity by @xylar in #1053
• Switch to writing thumbnails as jpgs by @xylar in #1055
• In CI, update docs build version to 3.13 by @altheaden in #1056
• Raise error if mpas_analysis is installed in different worktree by @xylar in #1057
• Remove the QU480 test from the test suite by @xylar in #1059
• Update water cycle defaults in test suite by @xylar in #1060
• New sea ice fields (pond area fraction, snow melt rate, and snow-ice formation rate) and updates to existing analyses by @eclare108213 in #1058
• Fix computation of barotropic streamfunction by @xylar in #1063
• Constrain mpas_tools <1.0.0 by @xylar in #1067
• Add regionNames coordinate to NetCDF output with "standard" region names by @xylar in #1066
• Set decode_timedelta=False to avoid future warnings in xarray.open_dataset() calls by @xylar in #1070
• Add FRIS comparison grid by @irenavankova in #1071
• Fix inset bounds by @xylar in #1072
• Fix barotropic streamfunction calculation by @xylar in #1069
• Update Arctic and add North Atlantic BSF config options by @xylar in #1073
• Add missing colormaps by @xylar in #1076

New Contributors

• @irenavankova made their first contribution in #1037
• @eclare108213 made their first contribution in #1036
• @alicebarthel made their first contribution in #899

Full Changelog: 1.12.0...1.13.0

v1.12.0

This minor release includes several new analysis tasks: analysis of Greenland shelf regions; Surface mass and heat flux climatology maps; Velocity climatology map; and OSNAP transects. It also includes many bug fixes and major improvements in continuous integration and documentation.

Minor enhancements

• Add Greenland shelf regions to ocean analysis tasks by @cbegeman in #1004
• Mask ocean regional profiles by bottom depth by @cbegeman in #1005
• Add ocean surface mass flux climatology task by @cbegeman in #1007
• Enhance ocean conservation task by @cbegeman in #1003
• Update python, numpy, matplotlib and mpas_tools by @xylar in #1011
• Add surface heat fluxes to ocean climatology tasks by @cbegeman in #1012
• Add new ocean climatology subtask for velocity by @cbegeman in #1015
• Add OSNAP Arctic Transects transport time series by @anirban89 in #910
• Add pull request template by @altheaden in #1020

Clean up

• Remove unused package bottleneck by @xylar in #1028
• Cleanup unsupported python versions by @altheaden in #1016

Bug fixes

• Fix hovmoller plots for empty regions by @xylar in #1006
• Fix masking of remapped MPAS climatology maps by @xylar in #1009
• Fix cm.get_cmap() calls by @xylar in #1010
• Fix numpy.string_ --> numpy.bytes_ by @xylar in #1013
• Bug fixes for time series conservation task by @cbegeman in #1014

Documentation

• Update sphinx-multiversion config options by @xylar in #1021
• More fixes to sphinx multiversion by @xylar in #1022
• Remove versions page from the docs by @xylar in #1023
• Add versions to sidebar by @xylar in #1024
• Fix version side bar by @xylar in #1025
• Fix docs config for version side bar by @xylar in #1026

Continuous integration

• Update pip install flags in docs and CI by @altheaden in #1017
• Transition CI from Azure Pipelines to GitHub Actions by @altheaden in #1019
• Add dependabot workflow by @altheaden in #1027

New Contributors

• @altheaden made her first contribution in #1016

Full Changelog: 1.11.0...1.12.0

v1.11.0

A minor release that fixes an issue with scipy, allows for newer versions of ESMF and supports masking out problem sea-ice cells.

Minor enhancement:

• Relax constraint on ESMF #997
• Add support for maximum allowed sea-ice thickness #998

Bug fixes

*Fix tukey import in latest scipy #1000

Contributors

@xylar

v1.10.0

A minor release that adds melt rate analysis from Paolo et al. (2023) and a new ocean conservation task. This release also includes numerous bug fixes and bits of clean-up.

Major enhancement:

• Add Paolo et al. (2023) melt rate analysis #987
• New ocean conservation task #988

Minor enhancement:

• Update to pyremap>=1.2.0
• If available, plot climatology of total melt rate #989

Bug fixes

• Divide sea ice area/volume data into 10 year chunks #982
• Fix arrows in barotropic streamfunction plots #985
• Fix Adusumilli variable name #990
• Don't use srun to call ncremap on PM and Chicoma #996

Clean up

• Fix dims --> sizes for xarray datasets #983
• Fix colorbars on OHC and BSF difference plots #986
• Shorten titles of Frazil Accretion Rate plots #992
• Removed errorOnMissing and endYear = end config options #991

Continuous Integration

• Update CI to drop mamba #993

Contributors

@cbegeman
@darincomeau
@irenavankova
@wlin
@xylar

v1.9.1

A bug-fix release that fixes stats printed on global climatology maps.

Bug fixes

• Fix stats for climatology maps #977
• Update mesh name for Adusumilli observations #975

Clean up

• Add a trailing slash to printed URLs #978

Contributors

@golaz
@milenaveneziani
@xylar

v1.9.0

A minor release that adds new waves analysis and moves to Adusumilli et al. (2020) for Antarctic melt-rate observations. This release also includes numerous minor enhancements and bug fixes listed below.

Major enhancement:

• Add analysis task for waves #869
• Add Adusumilli et al. (2020) melt rates #961

Minor enhancement:

• Update to mache >=1.11.0 #944
• Support shapely 2.0 #940
• Update suite to python 3.11 #942
• Add a developer test suite that uses an existing conda env #953
• Update geometric_features to 1.2.0 #957
• Add support for data mode for land-ice fluxes #962

Bug fixes

• Constrain shapely #937
• Fix output on machines without web portal #946
• Fix depth slicing with non-ocean cells #948
• Skip making MOC basin masks if they exist #951
• Fix region masking for TS diagrams #954
• Fix NaNs in MOC postprocessing #955
• Various fixes to get the no_ncclimo test working again #956
• Fix coordinate order for Schmidtko seafloor T and S #963
• Don't use matplotlib 3.7.2 #969
• Update mesh name for Adusumilli observations #975

Clean up

• Rename master --> main #939

Documentation

• Update example config and job script for LANL #945

Continuous Integration

• Loosen constraint on conda #934
• Fix updating base env in Azure tests #943

Contributors

@sbrus89
@xylar

v1.8.0

Minor release that adds new features from the recent E3SM hackathon on MPAS-Analysis: Arctic regional analysis, barotropic streamfunctions, sea-ice production and melting and sea-surface height histograms. It also includes a variety of bug fixes, clean up and improvements to documentation.

Minor enhancement:

• Add support for remapping from MPAS vertices #906
• Add Arctic Ocean time series, profiles, and TS diagrams to polar regions #896
• Add Horizontal Streamfunction plots + Subpolar North Atlantic projection #898
• Add sea ice production/melting analysis tasks #907
• Add histogram plot type and ocean histogram task #917

Bug fixes

• Fix config file on the webpage #913
• Fixes to formatting and config options for climatologyMapBSF #918
• Fix comparison of sea-ice thickness vs. control #925
• Keep attributes in python climatology computations #930
• Fix masking of Hovmoller plots on different meshes #927

Clean up

• Switch to plotting sea-ice concentration and thickness on projection grids #915
• Add python 3.11, drop python <3.8 #924
• Bump python version in test suites #929
• Plot production, melt iceberg concentration on projection grids #928

Documentation

• Fix some docstrings #919
• Add docs and examples for sea ice production tasks #920
• Fix description of building the docs #921
• Fixup formatting in histogram documentation #923
• Fix complete config file name in log dir #926

Continuous Integration

• Disable latest conda in CI (for now) #932

Contributors

@anirban89
@cbegeman
@darincomeau
@milenaveneziani
@xylar

v1.7.2

Bug-fix release

Minor enhancement:

• Update postprocessed MOC to match analysis member #886
• Add a check for duplicate analysis tasks and subtasks #908

Bug fixes

• Fix hovmoller plot comparison #900
• Add missing var when continuing MOC calculation #901
• Make sure both CI and develoment environments don't include conda MPI #902
• Fix generate command-line flag #903
• Don't decode time as part of transect remapping #904
• Fix --list when trying to write geojson files #905

Clean up

• Improve error message on incorrect machine #892
• Clean up ClimatologyMapOHCAnomaly #894

Documentation

• Clean up the documentation in several places #893
• Add 3 tutorials for developers #895

Contributors

@xylar
@akturner
@alicebarthel
@anirban89
@cbegeman
@darincomeau
@jjbenedict
@katsmith133
@milenaveneziani
@vanroekel

v1.7.1

Bug-fix release

Bug fixes

• Fix region masking in observations #884
• Fix config options for reference-year climatologies #885
• Switch to noleap instead of gregorian_noleap #889

Contributors

@xylar
@darincomeau