Update merge_wf.nf - #261
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change input for cluster analysis to include the SNP distances
change to CATNIP
create NF module
update to latest version
adding catnip, updating NTMProfiler
oopsie forgot
adding catnip to the default params config
adding tree
publish json also
adding output file(s) with transmission cluster information
adding per-sample cluster output files
adding to the stub
collect input samples
take input sample ids
adding input ids
adding input ids
adding sample ids
fix to output only input samples clustering
stop 5snp/12snp overwrite
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change input for cluster analysis to include the SNP distances