Search results

Structural insights into clonal restriction and diversity in T cell recognition of two immunodominant SARS-CoV-2 nucleocapsid epitopes

vdjdb-records-paperA published study listing TCRs and cognate antigens with PubMed IDA published study listing TCRs and cognate antigens with PubMed ID

vdjdb-structuralInterop with structural dataInterop with structural data

Status: Open.

#470 In antigenomics/vdjdb-db;

· mikessh opened on Dec 13, 2025

PMID:41315082

vdj-10xscRNA-seq dataset prepared using 10X Genomics kit (or similar) with TCR/BCRscRNA-seq dataset prepared using 10X Genomics kit (or similar) with TCR/BCR

vdj-negativeNegative data on TCRs and epitopes they don't recognizeNegative data on TCRs and epitopes they don't recognize

vdjdb-records-paperA published study listing TCRs and cognate antigens with PubMed IDA published study listing TCRs and cognate antigens with PubMed ID

Status: Open.

#469 In antigenomics/vdjdb-db;

· mikessh opened on Dec 11, 2025

Cancers modulate p53 truncal neoantigen display to evade T cell detection

vdjdb-records-paper-pendingA placeholder for paper yet to be published that will be incorporated into VDJdbA placeholder for paper yet to be published that will be incorporated into VDJdb

Status: Open.

#468 In antigenomics/vdjdb-db;

· LuppovDaniil opened on Dec 7, 2025

A*24:01 allele misleading

vdjdb-records-formatting&proofreadingTypos and errors that need to be fixed in one or multiple VDJdb recordsTypos and errors that need to be fixed in one or multiple VDJdb records

Status: Open.

#467 In antigenomics/vdjdb-db;

· chagas98 opened on Dec 5, 2025

PMID:31187595

vdjdb-records-paperA published study listing TCRs and cognate antigens with PubMed IDA published study listing TCRs and cognate antigens with PubMed ID

Status: Open.

#466 In antigenomics/vdjdb-db;

· LuppovDaniil opened on Nov 25, 2025

' synthetic' and 'AspergillusOryzae ' antigen species fix

vdjdb-typosMinor typos to fixMinor typos to fix

Status: Open.

Bug

#465 In antigenomics/vdjdb-db;

· LuppovDaniil opened on Nov 24, 2025

Atomistic TCR-ligand interactions instruct memory T-cell differentiation

vdjdb-records-preprintA study listing TCRs and cognate antigens available on arxiv/biorxivA study listing TCRs and cognate antigens available on arxiv/biorxiv

Status: Open.

#464 In antigenomics/vdjdb-db;

· LuppovDaniil opened on Nov 10, 2025

TCR hash

vdjdb-build-infrastructureVDJdb aggregation, compilation and proofreading infrastructure developmentVDJdb aggregation, compilation and proofreading infrastructure development

Status: Open.

Feature

#463 In antigenomics/vdjdb-db;

· LuppovDaniil opened on Oct 26, 2025

V/J gene guesser

vdjdb-build-infrastructureVDJdb aggregation, compilation and proofreading infrastructure developmentVDJdb aggregation, compilation and proofreading infrastructure development

Status: Open.

Feature

#462 In antigenomics/vdjdb-db;

· LuppovDaniil opened on Oct 16, 2025

CDR3nt sequences addition

vdjdb-build-infrastructureVDJdb aggregation, compilation and proofreading infrastructure developmentVDJdb aggregation, compilation and proofreading infrastructure development

Status: Open.

Feature

#461 In antigenomics/vdjdb-db;

· LuppovDaniil opened on Oct 16, 2025

width fix in summary file

vdjdb-build-infrastructureVDJdb aggregation, compilation and proofreading infrastructure developmentVDJdb aggregation, compilation and proofreading infrastructure development

vdjdb-typosMinor typos to fixMinor typos to fix

Status: Open.

Bug

#460 In antigenomics/vdjdb-db;

· LuppovDaniil opened on Oct 11, 2025

PMID:41042909

vdjdb-records-paperA published study listing TCRs and cognate antigens with PubMed IDA published study listing TCRs and cognate antigens with PubMed ID

Status: Open.

#459 In antigenomics/vdjdb-db;

· mikessh opened on Oct 6, 2025