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Release/v6.29.0 #447

Merged
merged 63 commits into from
Apr 5, 2024
Merged

Release/v6.29.0 #447

merged 63 commits into from
Apr 5, 2024

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bnguyen-bcgsc
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Release Notes - IPR - Version client v6.29.0

Bug

  • [DEVSU-2225] - Signature box format changed in printed report
  • [DEVSU-2244] - CD8+ T cell score + percentile lost from immune section if edited
  • [DEVSU-2246] - report counts not displaying in project page

Task

  • [DEVSU-2193] - more front-page changes in print report
  • [DEVSU-2233] - Add option to SNV, CNV, SV, and exp tables to add to front page
  • [DEVSU-2239] - Do not display "mutation burden" field in summary page manual edit popup in IPR

Improvement

  • [DEVSU-2117] - table reorganization in IPR print report
  • [DEVSU-2240] - Add new 'Pediatric CD8+ T Cell Score' field in IPR tumour summary

bnguyen-bcgsc and others added 30 commits March 6, 2024 15:33
- DEVSU-2117
- Split genomic summary component to patient info + tumour summary and key alterations
- Rearrange therapeutic targets and chemoresistance tables in between tumour summary and key alterations
- Reduce cell white space and padding for therapeutic targets and chemoresistance table rows
- Make therapeutic targets and chemoresistance tables full width in print mode, even when empty
- Fix print beta layout for key alterations not carrying over from the split
- DEVSU-2117
- Reduce padding sizes of empty therapeutic targets and chemoresistance tables
- DEVSU-2233
- Add options to move SV, CNV, SNV, or EXP Outlier variants to the Key Alterations section in the Summary
- DEVSU-2117
- Add beta printview for therapeutic options table
- Hide empty tumour summary fields in beta print view
- Remove page break between therapeutic options and key alterations in printview
- Avoid page break in the middle of key alterations
- Adjust signature cards max width to keep all 3 reviewers on the same row
- Remove editable mutation burden field from tumour summary edit
- Add new fields to Immune Cell Type
- Adaptive label for CD8+ T Cell score and percentile
- Add pedsPercentage to ImmuneCellType
- Change font size of empty TO rows to be consistent with content font size
- Separate key alterations css from genomic summary
- Lint code
…xt-wrap

DEVSU-2225 Signature Box Print Format
- Add peds cd8+ t cell score, percentile, and comment fields to edit tumour dialog
- Enforce front end rules for new fields
- Add new pediatric columns to the immune section
- Reduce print title bar text size slightly to prevent clipping when diagnoses are long
- Adjust key alterations spacing for beta print view
- Rename key alterations css classes to accurately reflect components
- Add percentile visibility checkbox
- Fix null newTmburMutationData bug with comment front end warning
- Add visibility toggle for cd8+ percentile in tumour summary edit
- Enforce visibility rule for CD8+ percentile on genomic and rapid summaries
- Adjust size and margin of visibility toggles for both CD8+ percentile and TMB information
…tation-burden

DEVSU-2239 Remove Editable Mutation Burden Fields
Feat/DEVSU 2240 Editable Pediatric CD8+ T Cell Score and Percentile Fields
bnguyen-bcgsc and others added 19 commits March 26, 2024 16:27
- Reformat key alterrations variant types in print table
- Change 'captiv 8' spelling to CAPTIV-8
- Realign logo with other components in beta printview
- Increase report title font size in beta printview
- Add separating commas between key alterrations variants
- Change config host back to process.env.HOSTNAME
- Add missing dependencies in Rapid Summary
- Change snackbar notification timing when confirm dialog shows up while adding variant to key alterations
- Update scss className to accurately reflect variant edit dialog className
- Update spelling and formatting of confirm dialog
- Merge branch 'feat/DEVSU-2233-move-variants-to-summary-option' into feat/DEVSU-2193-print-report-styling
- Update running center from 'BCCA Confidential' to 'BC Cancer Confidential'
…ummary-option

DEVSU-2233 Add Option to Move Somatic Variant to Key Alterations Section
…ssing

DEVSU-2246 Report Counts Missing in Projects
…sibility-toggle

DEVSU-2244 CD8+ T Cell Percentile Visibility Toggle
- Remove last comma in key alterations rows
- DEVSU-2193
…d reports still display existing values

- Remove redundant state property of totalMutationPerMb in tumour summary edit now that Mutation Burden is not editable anymore
- DEVSU-2239
…tation-burden

DEVSU-2239 Add Mutation Burden back to Genomic Summary and Rapid Summary
@bnguyen-bcgsc bnguyen-bcgsc added the release Release PR label Apr 2, 2024
@bnguyen-bcgsc bnguyen-bcgsc requested a review from elewis2 April 2, 2024 22:49
@bnguyen-bcgsc bnguyen-bcgsc self-assigned this Apr 2, 2024
bnguyen-bcgsc and others added 3 commits April 3, 2024 15:13
…t view

- Make 'Mutation Signature' plural
- Remove duplicate Mutation Burden display in Rapid Summary
- Merge develop into branch
- DEVSU-2193
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github-actions bot commented Apr 5, 2024

Test Results

    1 files  ±0    28 suites  ±0   4m 54s ⏱️ -1s
148 tests ±0  148 ✔️ ±0  0 💤 ±0  0 ±0 
145 runs  ±0  145 ✔️ ±0  0 💤 ±0  0 ±0 

Results for commit a4275a8. ± Comparison against base commit d686662.

♻️ This comment has been updated with latest results.

@elewis2 elewis2 requested a review from kttkjl April 5, 2024 20:12
@kttkjl
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kttkjl commented Apr 5, 2024

are here I thought I was spared from throwing thumbs

@bnguyen-bcgsc bnguyen-bcgsc merged commit d9c8598 into master Apr 5, 2024
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3 participants