rAMPage v1.0.1

Bug fixes:

• Fix compatibility on symlinks for input.txt in scripts
• Add shebang in cleave-seq.sh to specify python3
• Change pathname inference from end of line than beginning in run-AMPlify.sh
• Add support for conda version of AMPlify (instead of python script)
• Fix typos, uncomment code
• Update documentation and add additional scripts to clarify installing SignalP and ProP

rAMPage v1.0.0

• allow changing of putative AMP criteria after initial run of rAMPage without re-running AMPlify step
• implement new -of and -att options in AMPlify v1.0.3 and new scoring system
• bug fixes

rAMPage v0.9.1

• add option in rAMPage.sh and run-rnabloom.sh to make use of RNA-Bloom's -norr option to stop redundancy removal
• bug fix in run-amplify.sh

rAMPage v0.9.0

First public pre-release of rAMPage.