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Questions about subclass-level annotation merging and detailed subtype naming in CEMBA ATAC data

Status: Open.

#29 In beyondpie/CEMBA_wmb_snATAC;

· BeyondMyPast228 opened on Dec 18, 2025

Upload all the subclass-level proximal distal pairs and subclass-level specific enhancers.

enhancementNew feature or requestNew feature or request

Status: Open.

#28 In beyondpie/CEMBA_wmb_snATAC;

· beyondpie opened on Jul 23, 2025

Fix the lost of google drive links in the README.

bugSomething isn't workingSomething isn't working

Status: Open.

#27 In beyondpie/CEMBA_wmb_snATAC;

· beyondpie opened on Jul 23, 2025

Update the README description for our GEO

bugSomething isn't workingSomething isn't working

Status: Open.

#26 In beyondpie/CEMBA_wmb_snATAC;

· beyondpie opened on Jul 23, 2025

upload subclass-level CREs informaiton.

Status: Open.

#25 In beyondpie/CEMBA_wmb_snATAC;

· beyondpie opened on Apr 29, 2025

Provide a package to let uses to access any brain region and any cell type's tracks

enhancementNew feature or requestNew feature or request

Status: Open.

#24 In beyondpie/CEMBA_wmb_snATAC;

· beyondpie opened on Apr 24, 2025

remove Google drive link and upload meta data to Zenodo and NCBI

enhancementNew feature or requestNew feature or request

Status: Open.

#23 In beyondpie/CEMBA_wmb_snATAC;

· beyondpie opened on Mar 23, 2025

Integration with MERFISH to provide spatial results.

Status: Open.

#17 In beyondpie/CEMBA_wmb_snATAC;

· beyondpie opened on Jul 24, 2024

update README to include how we generate each figure

Status: Open.

#16 In beyondpie/CEMBA_wmb_snATAC;

· beyondpie opened on Jul 24, 2024

Upload liftOver-related codes and data for conservation analysis

Status: Open.

#15 In beyondpie/CEMBA_wmb_snATAC;

· beyondpie opened on Jul 12, 2024

Provide GithubPage like Allen's whole mouse brain

documentationImprovements or additions to documentationImprovements or additions to documentation

enhancementNew feature or requestNew feature or request

Status: Open.

#13 In beyondpie/CEMBA_wmb_snATAC;

· beyondpie opened on May 15, 2024

provide both L4-cluster level and subclass-level bed files.

enhancementNew feature or requestNew feature or request

Status: Open.

#7 In beyondpie/CEMBA_wmb_snATAC;

· beyondpie opened on Dec 9, 2023