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fix(create_knowledge_graph): print on stderr #9

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fix(create_knowledge_graph): print on stderr #9

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76f7945
fix(create_knowledge_graph): print on stderr
jdreo Jan 19, 2026
55852f0
feat(create_knowledge_graph): print import_file
jdreo Jan 21, 2026
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7 changes: 5 additions & 2 deletions create_knowledge_graph.py
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Original file line number Diff line number Diff line change
@@ -1,3 +1,4 @@
import sys
from biocypher import BioCypher, FileDownload
from template_package.adapters.example_adapter import (
ExampleAdapter,
Expand All @@ -20,7 +21,7 @@
lifetime=7, # seven days cache lifetime
)
paths = bc.download(resource) # Downloads to '.cache' by default
print(paths)
print(paths, file=sys.stderr)
# You can use the list of paths returned to read the resource into your adapter

# Choose node types to include in the knowledge graph.
Expand Down Expand Up @@ -63,7 +64,9 @@
bc.write_edges(adapter.get_edges())

# Write admin import statement
bc.write_import_call()
import_file = bc.write_import_call()

# Print summary
bc.summary()

print(import_file)