Workflows

Description of PANOPLY workflows

Workflows link together a few related modules-- typically an analysis module and a report module-- to form single cohesive analysis workflow. The following links provide documentation on each PANOPLY workflow:

• panoply_association_workflow
• panoply_blacksheep_workflow
• panoply_clumps_ptm_workflow
• panoply_immune_analysis_workflow
• panoply_metaboanalyst_workflow
• panoply_nmf_workflow
• panoply_nmf_internal_workflow
• panoply_normalize_filter_workflow
• panoply_process_SM_table
• panoply_sankey_workflow
• panoply_ssgsea_workflow