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cole-trapnell-lab

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monocle3 monocle3 Public

R 462 116
cufflinks cufflinks Public

C++ 323 115
monocle-release monocle-release Public

R 295 128
garnett garnett Public

Automated cell type classification

R 116 29
cicero-release cicero-release Public

R 59 16
sci-plex sci-plex Public

repository containing analysis scripts and auxiliary files

R 39 3

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Showing 10 of 36 repositories

platt Public

cole-trapnell-lab/platt's past year of commit activity

R 4 MIT 0 12 0 Updated Jul 23, 2026
cole-trapnell-lab.github.io Public

cole-trapnell-lab/cole-trapnell-lab.github.io's past year of commit activity

HTML 14 12 3 4 Updated Jun 2, 2026
monocle3 Public

cole-trapnell-lab/monocle3's past year of commit activity

R 462 116 251 8 Updated May 26, 2026
hooke Public
A package for comparing cell type abundances between conditions

cole-trapnell-lab/hooke's past year of commit activity

R 11 1 21 0 Updated May 20, 2026
leidenbase Public

cole-trapnell-lab/leidenbase's past year of commit activity

C 15 13 13 2 Updated May 20, 2026
trapnell-cluster Public
Common scripts for working on the cluster

cole-trapnell-lab/trapnell-cluster's past year of commit activity

Shell 0 2 0 0 Updated Apr 1, 2026
cicero-release Public

cole-trapnell-lab/cicero-release's past year of commit activity

R 59 MIT 16 11 1 Updated Mar 18, 2026
cicero Public

cole-trapnell-lab/cicero's past year of commit activity

R 12 MIT 9 0 0 Updated Mar 18, 2026
homebrew-trapnell Public
Custom Homebrew R formula with accelerated linear algebra support

cole-trapnell-lab/homebrew-trapnell's past year of commit activity

Ruby 3 1 0 0 Updated Oct 8, 2025
garnett Public
Automated cell type classification

cole-trapnell-lab/garnett's past year of commit activity

R 116 MIT 29 8 0 Updated Jan 3, 2025

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