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Add qc stats for barcodes

Status: Open.

#11 In cole-trapnell-lab/ATAC-Pipeline-Dev;

· Delasa opened on Jan 2, 2018

Deal with weirdo chromosomes

Status: Open.

#10 In cole-trapnell-lab/ATAC-Pipeline-Dev;

· hpliner opened on Oct 31, 2017

Add Darren's by cell dedup code

Status: Open.

#9 In cole-trapnell-lab/ATAC-Pipeline-Dev;

· hpliner opened on Oct 31, 2017

Make table of excluded/versus not barcodes

Status: Open.

#8 In cole-trapnell-lab/ATAC-Pipeline-Dev;

· hpliner opened on Oct 31, 2017

Add Andrew's nucleosome thing

Status: Open.

#7 In cole-trapnell-lab/ATAC-Pipeline-Dev;

· hpliner opened on Oct 31, 2017

cut insert sizes at 1000

Status: Open.

#6 In cole-trapnell-lab/ATAC-Pipeline-Dev;

· hpliner opened on Oct 31, 2017

Move mitochondrial count

Status: Open.

#5 In cole-trapnell-lab/ATAC-Pipeline-Dev;

· hpliner opened on Oct 31, 2017

Other genomes

Status: Open.

#3 In cole-trapnell-lab/ATAC-Pipeline-Dev;

· hpliner opened on Oct 23, 2017

barnyard experiments

Status: Open.

#2 In cole-trapnell-lab/ATAC-Pipeline-Dev;

· hpliner opened on Sep 5, 2017