Add ChatSpatial: MCP server for spatial transcriptomics#10
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cafferychen777 wants to merge 2 commits into
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Add ChatSpatial: MCP server for spatial transcriptomics#10cafferychen777 wants to merge 2 commits into
cafferychen777 wants to merge 2 commits into
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mLLMCelltype is a comprehensive R/Python package for automated cell type annotation in single-cell RNA-seq data using multiple large language models (OpenAI, Anthropic, Google Gemini, etc.). It supports both R and Python environments with features like consensus annotation, interactive refinement, and custom base URL support for enterprise deployments. GitHub: https://github.com/cafferychen777/mLLMCelltype Paper: https://doi.org/10.1101/2025.04.10.647852
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Add ChatSpatial to the "Applications that use the GPT API" section.
ChatSpatial is an MCP (Model Context Protocol) server that enables spatial transcriptomics analysis via natural language conversation. Built on schema-enforced orchestration, it integrates 60+ methods across Python and R ecosystems into a single conversational workflow.