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We moved to https://gitlab.com/flywheel-io/scientific-solutions/gears

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  1. matlab-mcr matlab-mcr Public archive

    Matlab Compiler Runtime

    Dockerfile 6 4

  2. SlicerFlywheelConnect SlicerFlywheelConnect Public archive

    A 3D Slicer Extension to view data from the flywheel heirarchy

    Python 4 3

  3. mri-deface mri-deface Public archive

    This gear uses the mri_deface tool from Free Surfer to deface an MRI image.

    Shell 3

  4. fsl-topup fsl-topup Public

    Flywheel Gear to execute TopUp from FSL

    Python 3 3

  5. freesurfer-recon-all freesurfer-recon-all Public archive

    Gear that runs FreeSurfer v7.2.0 Release (July 19, 2021)

    Shell 3 3

  6. c-pac c-pac Public archive

    Configurable Pipeline for the Analysis of Connectomes (C-PAC)

    Python 2 1

Repositories

Showing 10 of 63 repositories
  • eeg-classifier Public archive

    Classification tool for EEG data

    flywheel-apps/eeg-classifier’s past year of commit activity
    Python 0 0 0 0 Updated Sep 8, 2025
  • ptd_header_parser Public archive

    Parses header information from *.ptd files and saves the outputs as JSON

    flywheel-apps/ptd_header_parser’s past year of commit activity
    Python 0 0 0 0 Updated Sep 8, 2025
  • csv-import Public archive

    Parse a CSV and place CSV info into Subject info using the Python SDK

    flywheel-apps/csv-import’s past year of commit activity
    Python 0 1 0 1 Updated Sep 8, 2025
  • mri-deface Public archive

    This gear uses the mri_deface tool from Free Surfer to deface an MRI image.

    flywheel-apps/mri-deface’s past year of commit activity
    Shell 3 0 1 1 Updated Sep 8, 2025
  • pydeface-gear Public archive

    A flywheel gear to remove facial structure from MRI images.

    flywheel-apps/pydeface-gear’s past year of commit activity
    Python 1 MIT 0 0 0 Updated Sep 8, 2025
  • DICOM-to-MIPS Public archive

    Generates MIP png images, given a DICOM archive

    flywheel-apps/DICOM-to-MIPS’s past year of commit activity
    Shell 1 0 0 0 Updated Sep 8, 2025
  • fsl-fslhd Public archive
    flywheel-apps/fsl-fslhd’s past year of commit activity
    Python 0 0 0 0 Updated Sep 8, 2025
  • Ants_RegistrationSynQuick Public archive
    flywheel-apps/Ants_RegistrationSynQuick’s past year of commit activity
    Python 0 1 0 1 Updated Sep 8, 2025
  • Gear-Building-Tutorial Public archive

    repositories for the gear building tutorial

    flywheel-apps/Gear-Building-Tutorial’s past year of commit activity
    Python 1 2 1 0 Updated Sep 8, 2025
  • redcap Public archive
    flywheel-apps/redcap’s past year of commit activity
    Python 0 1 0 0 Updated Sep 8, 2025
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