Merge pull request #985 from fulcrumgenomics/yfarjoun-typo-in-update-gff-contig-name

yfarjoun · web-flow · commit ba0788ea4ea9 · 2024-05-16T00:27:25.000-04:00
Update UpdateGffContigNames.scala (typo in docs)
diff --git a/src/main/scala/com/fulcrumgenomics/util/UpdateGffContigNames.scala b/src/main/scala/com/fulcrumgenomics/util/UpdateGffContigNames.scala
@@ -34,7 +34,7 @@ import com.fulcrumgenomics.sopt.{arg, clp}
 
 @clp(description =
   """
-    |Updates then contig names in a GFF.
+    |Updates the contig names in a GFF.
     |
     |The name of each sequence must match one of the names (including aliases) in the given sequence dictionary.  The
     |new name will be the primary (non-alias) name in the sequence dictionary.

Original file line number	Diff line number	Diff line change
`@@ -34,7 +34,7 @@ import com.fulcrumgenomics.sopt.{arg, clp}`
`34`	`34`
`35`	`35`	`@clp(description =`
`36`	`36`	`"""`
`37`		`- \|Updates then contig names in a GFF.`
	`37`	`+ \|Updates the contig names in a GFF.`
`38`	`38`	`\|`
`39`	`39`	`\|The name of each sequence must match one of the names (including aliases) in the given sequence dictionary. The`
`40`	`40`	`\|new name will be the primary (non-alias) name in the sequence dictionary.`