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@funkelab

Funke lab

Janelia Research Campus

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  1. gunpowder gunpowder Public

    A library to facilitate machine learning on multi-dimensional images.

    Python 82 57

  2. lsd lsd Public

    🌈

    Python 54 36

  3. daisy daisy Public

    Block-wise task scheduling for large nD volumes.

    Python 30 18

  4. motile motile Public

    Multi-Object Tracker using Integer Linear Equations

    Python 30 5

  5. cellulus cellulus Public

    Unsupervised Instance Segmentation in Microscopy

    Python 23 2

  6. linajea linajea Public

    Python 18 7

Repositories

Showing 10 of 76 repositories
  • motile_tracker Public

    An application for interactive for tracking with motile

    funkelab/motile_tracker’s past year of commit activity
    Python 7 BSD-3-Clause 4 47 2 Updated Apr 25, 2025
  • finn Public

    finn is (not) napari

    funkelab/finn’s past year of commit activity
    Python 3 BSD-3-Clause 1 25 3 Updated Apr 24, 2025
  • funtracks Public

    A data model for cell tracking with actions, undo history, and more!

    funkelab/funtracks’s past year of commit activity
    Python 2 BSD-3-Clause 0 4 0 Updated Apr 22, 2025
  • tree_view_sandbox Public

    A sandbox repo for developing a VisPy lineage tree viewer

    funkelab/tree_view_sandbox’s past year of commit activity
    Python 0 1 0 1 Updated Apr 18, 2025
  • structsvm Public
    funkelab/structsvm’s past year of commit activity
    Python 1 MIT 1 0 0 Updated Apr 16, 2025
  • blinx Public
    funkelab/blinx’s past year of commit activity
    Python 4 2 5 0 Updated Apr 16, 2025
  • blinx_paper Public

    blinx paper

    funkelab/blinx_paper’s past year of commit activity
    TeX 0 1 0 0 Updated Apr 16, 2025
  • geff Public

    Reference implementation of the Graph Exchange File Format

    funkelab/geff’s past year of commit activity
    Python 0 MIT 0 9 2 Updated Apr 15, 2025
  • spatial_graph Public

    A spatial graph datastructure for python

    funkelab/spatial_graph’s past year of commit activity
    C++ 4 MIT 1 2 1 Updated Apr 15, 2025
  • ilpy Public

    Unified python wrappers for popular ILP solvers

    funkelab/ilpy’s past year of commit activity
    Python 3 MIT 3 4 1 Updated Apr 15, 2025
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