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21 changes: 18 additions & 3 deletions content/community/sig/earth/index.md
Original file line number Diff line number Diff line change
Expand Up @@ -15,7 +15,7 @@ Whether you are analysing geosphere, biosphere, cryosphere, hydrosphere, and atm

**Tools for earth data analysis are freely available** in the ToolShed which can be installed on any Galaxy server.

If tools are missing or information is not up-to-date in the list, please help us! Contact [Marie](mailto:marie14.josse@gmail.fr) or [Jérôme](mailto:jerome.detoc@ifremer.fr) about it.
If tools are missing or information is not up-to-date in the list, please help us! Contact us on Matrix channel **[Earth Climate Ecology Sciences](https://matrix.to/#/#galaxyproject_earth-climate-ecology-sciences:matrix.org)** or reach out by mail to one of us [Marie](mailto:marie14.josse@gmail.fr), [Yvan](mailto:yvan.le-bras@mnhn.fr) or [Jérôme](mailto:jerome.detoc@ifremer.fr) about it.

## Workflows and tutorials

Expand All @@ -29,24 +29,31 @@ Several curated Galaxy workflows are publicly available for different kinds of e
|--------|----------|--------------|----------|
| Coastal water dynamics | Oceanographic study | <a href="https://training.galaxyproject.org/training-material/topics/climate/tutorials/ocean-variables/tutorial.html" aria-hidden="true"><Icon name="graduation-cap" /></a> | <a href="https://training.galaxyproject.org/training-material/topics/climate/tutorials/ocean-variables/workflows/" aria-hidden="true"><Icon name="share-2" /></a> |
| Biogeochemical and physical ocean study | Oceanographic study | <a href="https://training.galaxyproject.org/training-material/topics/climate/tutorials/argo_pangeo/tutorial.html" aria-hidden="true"><Icon name="graduation-cap" /></a> | <a href="https://training.galaxyproject.org/training-material/topics/climate/tutorials/argo_pangeo/workflows/" aria-hidden="true"><Icon name="share-2" /></a> |
| Argo-Glider Nitrate QCV | Oceanographic study | <a href="https://training.galaxyproject.org/training-material/topics/climate/tutorials/ocean_qcv_analysis/tutorial.html" aria-hidden="true"><Icon name="graduation-cap" /></a> | <a href="https://training.galaxyproject.org/training-material/topics/climate/tutorials/ocean_qcv_analysis/workflows/" aria-hidden="true"><Icon name="share-2" /></a> |

### Land

| Target | Analysis | GTN Tutorial | Workflow |
|--------|----------|--------------|----------|
| Land degradation | Land study | <a href="https://training.galaxyproject.org/training-material/topics/ecology/tutorials/ndvi_openeo/tutorial.html" aria-hidden="true"><Icon name="graduation-cap" /></a> | <a href="https://training.galaxyproject.org/training-material/topics/ecology/tutorials/ndvi_openeo/workflows/" aria-hidden="true"><Icon name="share-2" /></a> |
| Collaboration with JupyterGIS | Land study | <a href="https://training.galaxyproject.org/training-material/topics/climate/tutorials/jupytergis_collaboration/tutorial.html" aria-hidden="true"></a> | None |
| QGIS Web Feature Services | Land study | <a href="https://training.galaxyproject.org/training-material/topics/ecology/tutorials/QGIS_Web_Feature_Services/tutorial.html" aria-hidden="true"></a> | None |
| 3Dtrees: Point cloud processing | Land study | TBD| TBD |

### Biodiversity

| Target | Analysis | GTN Tutorial | Workflow |
|--------|----------|--------------|----------|
| Marine omics | Marine biodiversity study | <a href="https://training.galaxyproject.org/training-material/topics/ecology/tutorials/obisindicators/tutorial.html" aria-hidden="true"></a> | <a href="https://training.galaxyproject.org/training-material/topics/ecology/tutorials/obisindicators/workflows/" aria-hidden="true"><Icon name="share-2" /></a> |
| Biodiversity data exploration | Biodiversity state of the art | <a href="https://training.galaxyproject.org/training-material/topics/ecology/tutorials/biodiversity-data-exploration/tutorial.html" aria-hidden="true"></a> | <a href="https://training.galaxyproject.org/training-material/topics/ecology/tutorials/biodiversity-data-exploration/workflows/" aria-hidden="true"><Icon name="share-2" /></a> |

### Atmosphere

| Target | Analysis | GTN Tutorial | Workflow |
|--------|----------|--------------|----------|
| Volcano | Volcanic eruption atmosphere study | <a href="https://training.galaxyproject.org/training-material/topics/climate/tutorials/sentinel5_data/tutorial.html" aria-hidden="true"></a> | <a href="https://training.galaxyproject.org/training-material/topics/climate/tutorials/sentinel5_data/workflows/" aria-hidden="true"><Icon name="share-2" /></a> |
| Getting your hands on climate data | Atmospheric study | <a href="https://training.galaxyproject.org/training-material/topics/climate/tutorials/climate-101/tutorial.html" aria-hidden="true"></a> | <a href="https://training.galaxyproject.org/training-material/topics/climate/tutorials/climate-101/workflows/" aria-hidden="true"><Icon name="share-2" /></a> |
| Volcanic eruption atmosphere study | Atmospheric study | <a href="https://training.galaxyproject.org/training-material/topics/climate/tutorials/sentinel5_data/tutorial.html" aria-hidden="true"></a> | <a href="https://training.galaxyproject.org/training-material/topics/climate/tutorials/sentinel5_data/workflows/" aria-hidden="true"><Icon name="share-2" /></a> |
| Pangeo ecosystem 101 for everyone - Introduction to Xarray Galaxy Tools | Atmospheric study | <a href="https://training.galaxyproject.org/training-material/topics/climate/tutorials/pangeo/tutorial.html" aria-hidden="true"></a> | <a href="https://training.galaxyproject.org/training-material/topics/climate/tutorials/sentinel5_data/workflows/" aria-hidden="true"><Icon name="share-2" /></a> |

Want to include your workflow here? Let us know!

Expand All @@ -62,15 +69,23 @@ The Galaxy community organizes regularly training events. You can check the [eve

# How is Galaxy used for earth data analysis?

## Projects / Showcases
## Institutes / Projects

Below is a list of projects involving members of this community:

| Project | Description |
|---------|-------------|
| [Data Terra EOSC node](https://www.data-terra.org/eosc/) | The EOSC Node for the Earth system and environmental sciences |
| [GAIA Data](https://www.gaia-data.org/) | Aims at operating a distributed and integrated infrastructure of data and services for observing and modeling the Earth system, biodiversity, and the environment |
| [EOSC FAIR-EASE](https://fairease.eu/) | A new approach to observation and modelling of the Earth System, Environment and Biodiversity |
| [EOSC AquaINFRA](https://aquainfra.eu/) | Develops data and services to support marine and freshwater scientists and stakeholders |

Below is a list of institutes supporting this work:

| Project | Description |
|---------|-------------|
| [Data Terra](https://www.data-terra.org/) | research infrastructure — works on earth system data, open science, and has dynamic communities across it's five thematic hubs (AERIS, FORMATER, ODATIS, PNDB, and THEIA). |
| [LifeWatch ERIC](https://www.lifewatch.eu/) | a European e-Science infrastructure for biodiversity and ecosystem research, providing virtual labs, services, and a thriving community across the biodiversity domain. |

## Join us

Expand Down