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@gatech-genemark

gatech-genemark

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  1. ProtHint ProtHint Public

    Protein hint generation pipeline for gene finding in eukaryotic genomes

    Python 60 13

  2. GeneMark-ETP GeneMark-ETP Public

    GeneMark-ETP: gene finding in eukaryotic genomes supported by transcriptome sequencing and protein homology

    AMPL 26 6

  3. MetaGeneMark-2 MetaGeneMark-2 Public

    MetaGeneMark-2: Improved Gene Prediction in Metagenomes

    AMPL 22 5

  4. GeneMark-EP-plus GeneMark-EP-plus Public

    GeneMark-EP and -EP+: automatic eukaryotic gene prediction supported by spliced aligned proteins

    11 1

  5. Mgcod Mgcod Public

    Tool for recognizing genetic codes (incl. multiple genetic codes in phage genomes) and genetic-code-informed annotation of coding regions in prokaryotic sequences

    Python 9

  6. EukSpecies-BRAKER2 EukSpecies-BRAKER2 Public

    Repository with data of eukaryotic species used in BRAKER2 experiments

    Perl 5 2

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