Methods pairs_to_features, generate_kmer_vecs and other utilities like it should be moved to the transformer interface.
Currently, pairs_to_features calls the PSeAAC class internally and applies it. Instead, this should be a method of a sa PSeAAC transformer.
The interface to follow is that in #106 and #170.
An example that can be used as template is the GreedyEncoder, in trafos.
Methods
pairs_to_features,generate_kmer_vecsand other utilities like it should be moved to the transformer interface.Currently,
pairs_to_featurescalls thePSeAACclass internally and applies it. Instead, this should be a method of a saPSeAACtransformer.The interface to follow is that in #106 and #170.
An example that can be used as template is the
GreedyEncoder, intrafos.