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Add pixi configuration
#6
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update readme
update readme
Add ngmesh reader, new pyfqmr source and update readme
add additional extension as .ng for .ngmesh
Refactor configuration and dask parallelization
updates to fix crashing for large meshes
Fix issue where meshes get compressed to nothing
Updates to speed up distributed tasks
allow for negative vertices
modify how grid_offset is calculated
update README
allow loading of json meshes, which required copying due to read only…
quick fixes for empty meshes
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thanks so much! ill take a look in the near future. also take a look at igneous. igneous seems great, but many of my other repositories rely on dask, so i have been incorporating code from igneous into a new repository (with some other methods i find useful). I hope to include multires in there as well so ultimately one can go straight from segmentations to multires meshes. i will try to update once completed. |
Solution for #2.
This PR adds a
pixiconfiguration tested on macOS (Apple Silicon).Trying out the PR on macOS should be as simple as running
pixi run demo-local. Same for other operating systems, but first one need to add the new platform inpyproject.toml.To visualize the data with
neuroglancerI installed http-server and ranthen I used this script